Verticillium alfalfae: VDBG_02465
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Entry
VDBG_02465 CDS
T02227
Name
(RefSeq) helicase SWR1
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
val
Verticillium alfalfae
Pathway
val03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
val00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
VDBG_02465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
val03036
]
VDBG_02465
Chromosome and associated proteins [BR:
val03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
VDBG_02465
SWR1 complex
VDBG_02465
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
Motif
Other DBs
NCBI-GeneID:
9533971
NCBI-ProteinID:
XP_003008277
UniProt:
C9SAR7
LinkDB
All DBs
AA seq
1183 aa
AA seq
DB search
MHGTWENVRAEINRRRLQEWEVEEQRRVKAALNEAVNLSEQKLQAQRGQIGSDEDEDEED
DEDIDEEDSEDDLAATDDENALGHDDASSMDADDDDSGDDDVMSSSDEDDEPANDSLVDA
ADETLTQDQLRAKYSNIPDLVKEDEEKTTNGIRTSPGATAGGDEGSDSTDESIDMDDDMG
SSDEGSDEDDDDDMETGSGSEGESDEGEPANLLGLFFDKKELQQMQETPKDETEDRSEPP
SEQAEKKKALQTPSKARDLPLPAWDSGKKHDVSLALHDDMEDEDDDEPELVTIPPSDPVT
GDDTPDVGDGERPTTNGHVETGVVDEPVTNGIAHSLEATTDTTVATSQDVDMTDAPVPLE
SLPEFAVTSPQSTPVKPTSSGADTMMAPPEVGKPTSSPTPDSKPSDADSTALIPAPKDDT
SRSVSPSPASAAKTEVPFLLRGTLREYQHFGLDWLAGLYANNTNGILADEMGLGKTIQTI
ALLAHLACHHEVWGPHLVVVPTSVMLNWEMEFKKFLPGFKILSYYGTQEERKRKRHGWNN
DDVWNVCVTSYQLVLQDQQHAVAEQPDRVVVAALSSCRRRTALVVLPICRSSMIGSISQS
LRSSRAAAFTMDEEARAIISKLHKVLRPYLLRRLKADVEKQMPAKYEHVEFCRLSKRQRE
LYDGFLARADTRDTLASGNYMSIINCLMQLRKVCNHPDLFVDRPIMTSFRMQKSVAADYN
DTNEFLRRTILAQDAMKLVSLGVVNLIPTQHEGLSSTDAERISQLSLHRVLLDLREAQNA
RAHMARTNLDPSTAESNLVYLESLGRWRRFEELQHCVYLNALRGQRRPIYGKRLVQFLTL
DLQQRPRKPRPRVAKNILNWFAEDSGFLRATIHSMDDRAASMETIIQKFACVTPSVITRD
MTEIVLGKRAIDAFTEADLSLSAPVRWAPFMQKQAPHDPWHEARMRLSIQFPDKRLLQYD
CGKLQALDKLLRKLQAGGHRALIFTQMTKVLNILEQFLNIHGHKYLRLDGATKVEQRQIL
TDRFNNDPRILCFILSTRSGGLGINLTGADTVIFYDQDWNPAMDKQCQDRCHRIGQTRDV
HIYRLVSEHTIEANILRKASQKQMLDDVVIQEGEFTTDYFREKMTVRDAVGEDAELVNDG
NAAANAAMDRLLGGGANGSESRNVGECSSLPKYKEDVDAAKGS
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atgcacgggacgtgggagaacgtgcgagctgagatcaacaggaggaggctgcaagaatgg
gaggtggaagagcagcggcgtgtcaaggctgctctgaacgaggcagtcaacctgtccgag
cagaagctacaggcccagcgcggccagatcggtagcgacgaggacgaagacgaggaagac
gacgaggacatcgacgaggaggactcggaggacgacttggctgctactgacgacgaaaac
gccctgggacatgacgacgcatcgtcgatggatgccgacgacgacgactctggcgacgat
gacgtcatgtcttcatctgacgaagacgatgagccggcgaacgactctctggtggatgct
gcagacgagaccctcacgcaagatcaactacgggcgaagtactcgaatattcccgacctg
gtcaaagaagacgaagaaaaaacaaccaatgggataaggacaagccccggcgcgaccgca
ggtggagatgaagggagtgactcgactgatgaatcaatcgacatggacgatgacatgggt
tctagtgatgaaggcagcgacgaggatgatgacgatgacatggagactgggtcgggttct
gaaggggagtccgatgaaggggagcctgcgaaccttctagggctctttttcgacaagaaa
gagctgcaacagatgcaagaaaccccgaaagatgagacggaagatcgatcagagccgcca
tctgagcaggctgagaagaagaaagcgctccaaacaccatccaaggcgcgggacctgcca
ctgcctgcatgggactctgggaagaagcatgatgtttcattggccttgcacgacgacatg
gaagacgaggatgacgatgaacctgagctggtcacaatcccaccgtcagacccagtcaca
ggcgacgatactcctgatgtgggcgatggcgagcgaccaactacgaacggccatgttgag
actggcgtagtcgacgagcctgtgaccaacggcattgcacacagtctcgaggctacaacg
gatacgacagtcgctacatcccaagatgttgacatgaccgatgccccggtgcctctggaa
tctctcccagaatttgccgtcacatctccgcagtctacaccagttaaacctacaagttct
ggtgcagatacgatgatggcgccgccagaggtcggaaagcccacttcgtcacccacaccc
gactcgaagccatcagacgccgactcgacagcactcatcccggcacccaaggacgacacg
agtaggtctgtgtcacccagtccagcatcggctgcaaagaccgaagtccccttcctgctt
cgcggcactcttcgagagtaccaacattttggcttggactggttggcaggcctttatgcc
aacaacaccaatggtatcctcgctgacgagatgggcctgggcaagacgatccagacaatc
gcgctgctggcccatcttgcgtgtcatcatgaagtgtggggccctcacttagttgtggta
ccgacgagcgtaatgctcaattgggagatggagttcaagaagtttttacctggcttcaag
atcctgtcctactatggaacacaggaggagcggaagcggaagcgccacggatggaacaac
gacgatgtgtggaacgtctgcgtcacttcttaccagctcgtccttcaagatcagcagcac
gccgttgcagaacaacctgaccgagttgtggtcgctgctctctcctcatgccgtcggaga
acggcgttggtggttttgccgatttgcaggagttccatgattggttccataagccagagt
ctcagatcctcgagagcggccgcgtttaccatggacgaagaagcgcgggcgatcatttcc
aagttgcacaaggttctgagaccgtacctgcttcggcgactcaaggccgatgttgagaag
cagatgcccgccaagtacgaacatgtcgaattctgccgcttgtcaaagcggcagagggaa
ctctatgacggcttcttggctcgggctgatacccgtgacaccctggcatctggcaactac
atgtccatcattaattgtctcatgcagttgcggaaagtgtgcaatcatcctgatcttttc
gtcgatcggcccatcatgacctccttccgaatgcaaaagagcgttgctgccgactacaac
gacacgaacgagtttctacggcggacaatcctggcgcaagatgccatgaagctcgtcagt
ctcggcgtggtcaatctgatccccacgcaacatgaagggctttccagcaccgatgcagag
cgcatctctcagttgagcttgcatcgagtactgctggacctccgagaagcccaaaatgcg
cgtgcgcacatggctcgcaccaacctcgatccttcaaccgctgagtcgaatctggtctat
cttgaaagcctcggtagatggcgacgtttcgaagagctgcaacattgcgtgtacctcaat
gccctccgtggacaacgccgtccgatttatggcaagcgattagtccagttcctgaccttg
gacctgcagcagcggcctcgtaagccccggcccagggttgcgaagaacatcctcaactgg
tttgctgaggactcaggattcctgcgcgcgacaatccacagcatggacgacagggcagcg
tccatggaaacgataatccaaaagtttgcgtgcgtgacgccatcggtcatcacgcgagac
atgactgaaatcgtcctcggcaagcgagccatcgatgcgttcactgaggccgacctcagt
ctctccgcaccagtgcgctgggcgccgttcatgcagaagcaggcgccgcacgacccgtgg
cacgaggctaggatgcggttgagtattcagttccccgacaaacgtctccttcagtacgat
tgtggcaaacttcaggcactcgacaagctgcttcgcaagcttcaggctggcggccatcgt
gcgttgatcttcacgcagatgaccaaggttctcaacattcttgagcagttcctcaacatc
cacggccacaagtacctgcgactcgatggtgcgaccaaggtcgagcagcgacagatcctc
acggacaggttcaacaacgatccgcgcatcctctgtttcatcctctccacccggtcaggt
ggcctgggcatcaacctgaccggcgccgacacggtcattttctatgaccaagactggaac
cccgccatggacaagcagtgtcaggacagatgtcatcgtataggccaaacacgtgacgtg
cacatttaccggctcgtcagtgagcacacgatcgaagccaacattctacgcaaggcgtcg
cagaagcaaatgctcgacgacgttgtcatccaggagggcgaattcacgacagactacttc
cgcgagaagatgacagtgcgcgacgccgtcggcgaggacgccgagcttgtcaacgacggc
aacgccgccgccaacgcggccatggaccgtctcctcggcggcggcgccaacggcagcgag
tcgcgcaacgtcggcgagtgctcgagcttgccgaaatacaaggaggacgtcgacgctgcc
aagggcagctga
DBGET
integrated database retrieval system
