Verticillium alfalfae: VDBG_02470
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Entry
VDBG_02470 CDS
T02227
Name
(RefSeq) hypothetical protein
KO
K20307
trafficking protein particle complex subunit 10
Organism
val
Verticillium alfalfae
Brite
KEGG Orthology (KO) [BR:
val00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
val04131
]
VDBG_02470
Membrane trafficking [BR:
val04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
VDBG_02470
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAPPC10_1st
DUF7077
TRAPPC10
TRS130_4HB
NTS_TR130
Foie-gras_1
DUF7076
TPR_12
Motif
Other DBs
NCBI-GeneID:
9533976
NCBI-ProteinID:
XP_003008282
UniProt:
C9SB01
LinkDB
All DBs
AA seq
1517 aa
AA seq
DB search
MEHPFSTSKVTVEYFDPHGVYKLLGPGLVPRLPLRNLHWQSHAGPLRSIDVLFVELVDTG
ADPAAAAPRATLRRSVSAGVQDDGFQTQQVGGKSASTDNIEPPAAAAQQPGKERRHQIPG
LRRTPYLKVLLVRCDDNDTYKATTRAEIRDWIKLHTPPSQSTRKANNQENHDAFEWLIVH
VVVPNTVAATQPRTSGKSAEGASSDKTASSRWRTGSSTLLEKMRADFNVTGKGAVDRIAQ
IRIGINDVPYDILPRVVPATPTGYSETEKDAEVAWQELLAKIKGLILASFDMRVTQYEDD
IREKDAQRLLPGWNFCTFFILKEGLARGFESVGLIEDALVGYDELSVGLDSVIHEQVATG
DSERNGGALLGYTAELKKQAEQAVAAATGGGNLEDEESVDLQSKELPAFSHFDEIPISST
KKLYRDMIVANNVSVFDFRCYIFGRQLALLLRSGNAWSSKEELLVKLKEQQESVLHGVAP
QAPAPKQAEDAENLTMLAEICRRTLQFIPAISQIMRADIMSAVSQPGGDSADHSVSPVVT
EVIDNLVASFAFSVAQQILAQTSTKSLPIPPSLMITPEIHEPKVSIPEPKTMMHPARTTS
LSVRTTTAAPHSPGIFPGPGAGQRASVPEGMSVAPTSQFLKNGLEDLAARRAELYNLSRN
VLEECGKKRGWGDGWASVPDVEDSGYETMEDVSLDDNEPLAKKAEAEVPQQPLLSGIEGR
LLQAALDNQDDFYRLYETLTDKALRHYTVADHNYAVQASMTDLAILKYHLGDYSAAASYF
YRVTPFYGETGWSVLELSMLIMYAHCLHELQRKDEYVRVVLKLLTKAAAAEKDRLARRKG
FRPGAGQDVEHASFAVIRGFVGKLLAVTKTFSNEVPVPLGQMFTNPQLDESPEYDVGLDS
FSLTIKLSSLLVDDLTIETARMRLTSSDPGVPKELWLESTTPQVLKPGESAIRLQSKTSV
SGRYDVDRLSLTSSNIHLHYERDIDHDSSKGAEAFLLPKVTVCRQEGGLDCQLTAARHTQ
LDRNNCLDLKLRTGWNNVTSCEIRVRPSTGGLRLLSTEAKFIGPSFEFASALEPGLFRFS
ALDPNTSVQLRFPFSTEQDVANISVKVDVIYSAEKGTYTFSAIPTIPISLALGVNVQDVF
KHNAVFSRFSVSTASPSPITVYKSELQQSDIFESHFGVAPSKPVVVFPKQPASLLYKITR
KKDVAVQPKTKKTLYLKVFYSVVLEQIVATVSRLVKQDILKSDLARYATLVEAQLQKQVP
GALSLFDLERAGLLGEISTSFLTKPAVDDSFRGLGKLPGSDKDAARAIASFIQDWQQKNP
KLALKSSETIEDAQSILIPVDVPSIPILFTIDIQLDKSLPSPVPRKDAGTPITGINQLLS
ANLTLKWTRRWDTSPGVTDSSTTPQEFTYDVTAPPDTWLLGGRKRGRVKVPALGTDSSTP
DQSVVNIPLIMVPLREGWLPYPSVDMREAKAEEDGLPPTQGHCETDYRNLGETVRVIADR
EKGHTQLGLQWARRRTT
NT seq
4554 nt
NT seq
+upstream
nt +downstream
nt
atggaacaccccttctcgacatccaaagtcaccgtcgagtacttcgatccccatggcgtc
tacaaactcctaggccctggcctcgtgccccgacttcctctccgaaacctccactggcaa
tcgcatgccggacctcttcgatcaattgatgtgttgttcgtcgagctcgtcgacactggt
gccgacccagctgccgctgcgcctcgtgccaccctaagacgttcggtcagcgcaggcgtt
caagacgatggcttccagacccagcaggtcggcggcaagagtgcatcgaccgacaacatc
gagccaccggcggcggcggcgcagcaacctgggaaagagcggcggcaccagattcccggt
ctgcgacgaaccccctatctcaaggtcctgctagtgcgatgcgacgacaacgacacgtac
aaggccacgacgcgcgccgagattcgcgactggatcaagctacacacgccaccttcccag
agtacaagaaaggcgaacaaccaggaaaaccacgatgcctttgagtggctcattgtgcat
gtggtcgtccccaacaccgtcgccgcgacccagcccagaacgagcggcaaaagcgccgag
ggcgccagcagcgacaagaccgcctcttcgagatggcggacggggtcttctacgttgctg
gagaagatgcgcgccgacttcaacgtcactggcaagggtgccgtggataggattgcccag
atcaggatcggcatcaatgacgtgccgtacgatatcctgcctcgcgtcgtaccagccacc
ccaaccggatactcggagactgagaaagacgcagaggttgcctggcaggagttgctggcg
aagatcaagggcttgatcctggcgtcgttcgacatgcgcgttacacagtacgaagatgac
attcgtgaaaaagatgcgcaacgtctgttaccaggttggaacttttgcacgtttttcatc
ctcaaggaaggcttggcgcgaggcttcgagagcgtcgggcttatcgaggatgcgctcgtt
ggctatgacgagctcagtgttggccttgactcggttatacacgaacaggtcgccacggga
gactcggagcgaaacggcggtgcgcttctggggtatactgccgagttgaaaaagcaggct
gaacaggctgttgcggcagcgaccggcggcgggaatctcgaagacgaagaatccgttgac
ctgcagtccaaggagcttcctgctttcagccactttgacgagatccccatcagctccaca
aagaagctttaccgcgacatgattgtagccaacaacgtctcggtgttcgactttcgttgc
tacatattcggccgccagctggccctgttgttgcgctcgggcaacgcatggtcctccaaa
gaggaactcctggtgaagctcaaggaacagcaagaatcagtgttgcatggcgttgcacca
caggcgcctgcaccaaaacaagcagaggatgcagagaacctcaccatgttggccgagatt
tgtcgaaggaccctacagttcatccccgccatatcacagatcatgcgagcagacatcatg
tcagctgtttcacagcctggtggcgactcagctgatcactcagtaagccctgtggtaaca
gaggtcattgacaatcttgtcgcatccttcgcattctcggttgctcagcaaatcctggcg
cagacgtcaaccaagtccctccccattccgccatcccttatgatcactcccgaaattcat
gagcccaaggtttccatccccgagcccaagaccatgatgcaccccgcccgaacaacgtct
ttaagtgtgcgaaccactacggcagctccccacagcccaggaatattccctggtccggga
gccggccaaagagccagtgttcccgagggcatgtctgtcgcgccgactagccagtttctc
aagaatggcctcgaagacctcgctgccaggcgtgccgagctctataatctctctcgtaat
gtgctggaagagtgcggcaagaagcgcggctggggtgatggctgggcttctgtgcccgac
gtcgaagactctggctatgagacgatggaggacgttagtcttgacgacaatgaacccctg
gcgaagaaggcagaggccgaggtccctcagcagcctctgctgtctggtattgagggccgc
cttcttcaggcagcgctcgataaccaagacgacttctaccgtctctacgagaccctaacg
gacaaggccttaaggcattacaccgttgccgaccataattatgccgttcaagccagcatg
actgatcttgcgattcttaaataccacctcggagactactcagcggcggcttcttacttc
tatcgagtgacgccgttctacggggaaactggctggagtgtgttggagctgtccatgctc
atcatgtacgcgcactgtctacatgagctacaacgcaaggacgaatacgttcgtgtggta
ctgaagctgctgacaaaagctgctgccgctgagaaagaccgccttgcgcgccgaaagggg
ttccgacctggcgccggacaagacgtggagcatgcctctttcgctgtcattcggggtttt
gtcggcaaactactggctgtgaccaagacattttccaacgaggttcctgtccctctggga
cagatgttcactaatcctcagttagacgagtcccccgagtatgacgtcgggctcgacagc
ttctctttgacgatcaaattgagtagcttactggtggatgacttaacgatcgagactgcg
cgcatgcgtcttacaagttctgaccccggtgttccaaaagagttgtggttggagagcaca
actcctcaagtgctcaagccaggcgagagcgccattcgcctgcaaagcaagacaagcgtg
tccggacgttatgacgttgatcgcctgagtctgacctccagtaatattcatctccactac
gaacgcgacattgatcacgactcctcgaaaggagctgaggccttccttcttccgaaggtc
acagtgtgtcgccaagaaggcggtttggactgccaacttactgcagcgcgccacacacag
ctagaccgtaacaactgtctcgatctgaagcttcgtactggttggaataacgtcacgtct
tgcgagatacgagtgaggcccagcactggtggacttcgtcttttgtctacagaggccaaa
ttcatcggaccttcattcgaattcgcaagtgcgctcgagccaggattgttccgattcagt
gcgctcgatcccaatacaagtgtgcagcttcgatttccattttccactgagcaggacgtt
gccaatatctctgtcaaagtcgacgtcatctattcagctgagaagggtacatacaccttc
tctgcgatacccactattcccatctcgttggccctcggcgtcaacgtccaagatgtcttc
aaacacaatgcagtcttctctcggttcagcgtctccactgcgtcaccgagcccgatcacc
gtgtacaagagcgaactgcagcaatccgacatattcgaatcacattttggagtcgcaccc
agcaagcccgtggtcgtcttccccaagcagccagcaagccttctctacaaaattacacgc
aaaaaggatgttgcggtacagccaaagacgaaaaagacattatatctgaaggtcttttac
agcgtcgtgcttgaacagatcgttgcaacagtcagcaggctcgtgaagcaagacattctt
aaatctgaccttgcgcgctatgcgacgctggtggaggcacaacttcagaagcaggtgccc
ggtgcgctttcgctgtttgacctcgagcgcgcaggactgcttggcgaaatctctacctcg
ttcctgacaaagccggctgtagatgattcgttcaggggcttgggaaagctaccgggcagc
gacaaggatgcagcgagagcgatcgccagctttatccaggactggcagcagaagaaccca
aagctcgctctgaagtcatccgagactatcgaagacgctcagtcgatccttattcccgtc
gatgttccgtccatcccaattctcttcacaatcgacatccagcttgacaaatcgctcccg
tcgccagtccctcgcaaagacgcgggcacccccatcacgggcatcaaccagcttctgtca
gccaacctgacgctcaagtggacacgcagatgggatacttcgccaggcgtcacggacagt
tctacgacgccgcaagagttcacatacgatgtcacggcgccacccgacacgtggctgctc
ggcggtcgcaagcggggccgcgtcaaggtcccagcactcggcactgatagctctacgccg
gatcaatcggtcgtaaacatcccgttgatcatggtgcccctccgcgagggctggctgccg
tatccgagcgttgacatgagggaggccaaagcggaggaggacgggctgccgccgacgcag
ggacactgcgagacggattatcggaatctgggcgagacggtcagggtcattgccgatcgg
gagaagggtcacactcagcttggactccagtgggcccggcggcggaccacttga
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integrated database retrieval system