Verticillium alfalfae: VDBG_02521
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Entry
VDBG_02521 CDS
T02227
Name
(RefSeq) sulfur controller 2
KO
K10259
F-box and WD-40 domain protein MET30
Organism
val
Verticillium alfalfae
Pathway
val04111
Cell cycle - yeast
val04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
val00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
VDBG_02521
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
VDBG_02521
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
val04121
]
VDBG_02521
Ubiquitin system [BR:
val04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
VDBG_02521
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_C
EIF3I
Beta-prop_TEP1_2nd
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_SCAP
Beta-prop_EML_2
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
F-box-like
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_Vps41
F-box
Beta-prop_Nup120_160
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
NBCH_WD40
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_DCAF12
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
F-box_4
WD40_like
Beta-prop_IFT140_2nd
Beta-prop_WDR11_2nd
Motif
Other DBs
NCBI-GeneID:
9535431
NCBI-ProteinID:
XP_003006382
UniProt:
C9SDJ1
LinkDB
All DBs
AA seq
646 aa
AA seq
DB search
MPTQLYTQTVTPFLREHIPGIYAPIGKPDTQASEEIKKEKDPNSKFCYRHRPDSKCRRAA
DESKMVKIQQELDTLPAADQQAITHVWSLFSAAPARHRDLMLQGIITQCCFPQLSTVSRE
VHEQLKIDFVAALPVEISWKVLSYLDTVSLCKAAQVSRRWRDLADHDVVWHHMCEQHIDR
KCTKCGWGLPLLERQKLRDWRRQQELKKRREEESHIAVATSATTNGSKKRELVIREDSRK
RTCHNAVGEDDSVSQSEPDKRFRPWKSVYRDRWKISYNWTRGRCAVKTFKGHENGVTALQ
FEDNILVTGSYDTKIKIWNIETGEEIRTLTGHTMGIRALKFVDNKLFSGSLDNTIKVWNW
QTGECISTLRCHSEGVISVDFDGKWLASGSIDKSVKIFNFDSKETFSLRGHDDWVNHVRL
DPVSQVVFSASDDCTVKIWDLENKTCIKTLEGHMGQVQQVLLMPEEFEPEEDLVPADSAD
AASATSGRSSTPSAYVHAASTLGSSFHDHGSSCQDDSRTAYGAAFANNPSRPLPPRYILT
AGLDNTVKLWCTASGKCLRTMFGHVEGIWGLVGDSLRMVTGANDAMVKIWDPRSGKCERT
FTGHTGPVTCVGLSDSRMASGSEDGEVRLYSFEADVPLLEEYGTPT
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgccgactcagctgtacacccagaccgtcacccccttcctgcgcgagcacatacccggc
atatatgcgcccatcggcaagccagacacccaagcgtccgaggagatcaagaaagaaaag
gatcccaacagcaagttttgctaccgacatcgacccgattccaaatgtcgacgagctgcc
gacgaaagcaagatggtcaagattcagcaggaacttgacactctaccagcagcagaccag
caagccatcactcatgtgtggtcgctcttctctgctgctcctgcgcggcaccgtgacctg
atgctgcaaggtatcattacgcagtgctgtttcccccagctctcaaccgtctcgcgggag
gttcatgaacaactgaaaatcgacttcgtcgccgcgcttcctgtggagatatcctggaag
gtcctgagctacctcgataccgtctcgttatgcaaagcagcccaggtcagccgccgctgg
cgtgacctcgcggaccacgacgtcgtctggcaccacatgtgcgagcagcatatcgatcgc
aagtgcacaaagtgcggctggggccttccccttcttgaacgacagaagctccgtgactgg
cgacggcagcaggagctgaagaagaggcgagaggaagaatcacatatcgctgttgccacc
tccgccaccacaaacggatcgaagaagagggagctcgtcatccgagaggacagccgcaag
agaacctgtcataacgccgtcggcgaagacgactccgtaagccaatcggaacccgacaag
agatttaggccatggaagagcgtttatcgagaccgatggaagatctcctacaactggacg
agagggcgctgcgctgtcaagacgttcaaggggcatgagaatggcgtcacagcgcttcag
tttgaagacaacatactcgtcaccggttcatacgacacgaagattaagatttggaacatc
gagacaggagaagagattcgaacattgacgggccacacgatgggcattcgagctttgaag
tttgtcgacaacaaactatttagtggcagtctcgacaatacgatcaaggtgtggaactgg
cagaccggcgaatgcattagcacactgcgttgccattccgaaggtgtgatttcggtcgac
tttgatggcaagtggctcgcttccggctccatcgataagtcggtcaaaattttcaatttt
gatagcaaggagacgttctctctgcgtggccatgacgattgggtcaaccatgtccggctc
gatccggtctcacaagttgtattttcggcttcagacgactgcactgtcaagatttgggat
ctggagaacaaaacatgcatcaagacccttgagggtcacatgggacaggttcagcaagtc
ttgctgatgccggaggagtttgagccagaagaagatctcgtacctgccgacagcgctgac
gctgcctctgccacgagtggccgaagcagcacgccgtcggcatatgttcacgcggcctcg
acattaggctcgtcgtttcatgatcacggttcttcctgccaagatgatagtcgcaccgcg
tacggtgcggcattcgcgaataacccctccaggccactgccgccgcggtacatcctcacc
gctggcttagacaacactgtcaagctttggtgtacggcatcaggcaaatgcctccgtacc
atgtttgggcacgtcgagggcatctggggtctcgtcggtgactcattgcgaatggtgacc
ggtgcgaatgatgccatggtcaaaatttgggatccccgatctggcaagtgtgagagaaca
tttactggccatacgggaccagtaacatgcgtcggactcagcgacagccgcatggcgagc
ggcagtgaagacggagaagtgcggctttacagtttcgaagctgacgtgcctcttctcgaa
gagtacggcaccccgacctga
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