KEGG   Verticillium alfalfae: VDBG_02524
Entry
VDBG_02524        CDS       T02227                                 
Name
(RefSeq) peptidyl-prolyl cis-trans isomerase ssp-1
  KO
K09578  peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:5.2.1.8]
Organism
val  Verticillium alfalfae
Pathway
val03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:val00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    VDBG_02524
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:val03021]
    VDBG_02524
   03110 Chaperones and folding catalysts [BR:val03110]
    VDBG_02524
Enzymes [BR:val01000]
 5. Isomerases
  5.2  cis-trans-Isomerases
   5.2.1  cis-trans Isomerases (only sub-subclass identified to date)
    5.2.1.8  peptidylprolyl isomerase
     VDBG_02524
Transcription machinery [BR:val03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     VDBG_02524
Chaperones and folding catalysts [BR:val03110]
 Protein folding catalysts
  Peptidyl prolyl isomerase
   Parvulin
    VDBG_02524
SSDB
Motif
Pfam: Rotamase Rotamase_3 WW Rotamase_2
Other DBs
NCBI-GeneID: 9535434
NCBI-ProteinID: XP_003006385
UniProt: C9SDJ4
LinkDB
AA seq 177 aa
MADAGLPPNWEVRHSNSKNLPYYFNTTDKVSRWEPPPGTDTEKLKHYMATHHSASTSRPA
DGPVPDGKIRAAHLLVKHEGSRRPSSWRQEKIDRTKEDAYSIIRGYEEKIKSGQSSLGDL
AVTESDCSSARKRGDLGYFGQGDMQREFEEAAFALKVGEVSGIIETASGLHLIERLE
NT seq 534 nt   +upstreamnt  +downstreamnt
atggctgacgccggacttcctcctaactgggaggtccgtcactcgaactcgaagaacctc
ccgtactacttcaatacaaccgacaaggtctcccgctgggagccgcccccaggcaccgac
acagagaaactcaagcattacatggccacccatcactcagcatcgacatcgcgtcctgct
gatggtcctgtacctgatggcaagattcgcgccgcccacctgcttgtgaagcacgaaggc
agccgccgtccctcctcttggcgtcaagagaagatcgaccgcacaaaggaggacgcgtac
agcatcattcgcggttacgaggagaagatcaaaagtggccagagcagccttggcgatctt
gctgtgaccgagagtgattgcagcagcgcgaggaagcgcggcgacctgggctactttggc
cagggagacatgcagcgcgagttcgaggaggcagcctttgcgctgaaggttggtgaagtc
agcggtatcattgaaacggcgagcggtctccatctgattgaaaggctggagtag

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