KEGG   Verticillium alfalfae: VDBG_02525
Entry
VDBG_02525        CDS       T02227                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB9
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
val  Verticillium alfalfae
Pathway
val03020  RNA polymerase
val03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:val00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    VDBG_02525
  09124 Replication and repair
   03420 Nucleotide excision repair
    VDBG_02525
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:val03021]
    VDBG_02525
   03400 DNA repair and recombination proteins [BR:val03400]
    VDBG_02525
Transcription machinery [BR:val03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     VDBG_02525
DNA repair and recombination proteins [BR:val03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      VDBG_02525
SSDB
Motif
Pfam: TFIIS_C RNA_POL_M_15KD Nudix_N_2 Elf1
Other DBs
NCBI-GeneID: 9535435
NCBI-ProteinID: XP_003006386
UniProt: C9SDJ5
LinkDB
AA seq 132 aa
MSSPKSATDEDTRGKPVEQITFRFCSECSNMLYPKQDDNSHRLQFTCRTCHYTEEAQSSC
VFRNVMNNAAGETAGVTQDVGSDPTLPREIISCPSCSHNEAVFFQSQQRSAETGMKLFYV
CCECGHIFQTQN
NT seq 399 nt   +upstreamnt  +downstreamnt
atgtcgtctccgaagtccgccactgacgaggacacgcgcggaaagcctgtcgagcagatc
acgttccgcttctgctcggagtgctcgaacatgctctaccctaagcaggacgataactcg
catcgtctgcagttcacatgtcgtacatgtcactacaccgaagaagcacaatcgagttgc
gtctttcgcaatgttatgaacaacgcggctggcgagacggctggcgtcacgcaggatgtt
ggttctgacccaactcttccgcgcgagattatttcctgcccgtcttgcagccacaatgag
gctgtcttctttcaatctcagcagcgaagtgcggagactggtatgaaactattctacgtt
tgctgcgaatgtggccatattttccaaacacaaaattag

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