Verticillium alfalfae: VDBG_02572
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Entry
VDBG_02572 CDS
T02227
Name
(RefSeq) multidrug resistance protein
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
val
Verticillium alfalfae
Pathway
val02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
val00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VDBG_02572
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
val02000
]
VDBG_02572
04147 Exosome [BR:
val04147
]
VDBG_02572
04090 CD molecules [BR:
val04090
]
VDBG_02572
Enzymes [BR:
val01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
VDBG_02572
Transporters [BR:
val02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
VDBG_02572
Exosome [BR:
val04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
VDBG_02572
CD molecules [BR:
val04090
]
Proteins
VDBG_02572
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
ABC_ATPase
AAA_16
RsgA_GTPase
AAA_22
AAA_25
AAA_21
AAA_28
nSTAND1
Rad17
Motif
Other DBs
NCBI-GeneID:
9535647
NCBI-ProteinID:
XP_003006433
UniProt:
C9SDX7
LinkDB
All DBs
AA seq
1249 aa
AA seq
DB search
MSNPPPEKPIASGTASSQGDSTEIEAHSHTNEKAATDKNDLEKADSKVATPPEAASQEDP
FKHLPDDEAAVLKRQIITPEVKAGVAALYRYSSTNDIIIIIISTLCAIAAGAALPLMTVI
FGNLQNVFQDYFVHRNMSHDDFTDELAKLVLYFVYLAIGEFVVSYISTVGFIYTGEHISA
QIRIHYLESCMRQNIGFFDNLGSGEVTTRITADTNLIQDGMSEKVSLTIAALATFIAAFV
IGFIFYWKLTLILFSTVVALVLVMGGGSTFIMKFNKQSIDSYAQGGSLADEVISSIRNAI
AFGTQDRLAKQYDVHLVKAEFFGFRVKGAIGCMVAAVAAAAKIYNTIDRVSPLDPSLDTG
DRLEKLEGTITLKGIKHIYPSRPEVVVMQDVSLTIPAGKTTALVGASGSGKSTIVGLVER
FYDPVQGSVYLDGHDIAKLNLRWLRQQMALVSQEPTLFGTTIFHNIRHGLIGTQHENESE
EKLRELVIGAAKKANAHDFITSLPEGYETNVGERGFLLSGGQKQRIAIARAIVSDPKILL
LDEATSALDTKSEGVVQAALEVAAEGRTTITIAHRLSTIRDAHNIVVMSEGRIVEQGTHD
ELLELNAAYYNLVTAQNIAAVNEMTPEEAAAIDEKDEQLIRQASRSKEGYVHDPQDDINL
NRTTTTKSASSVALQGKQPEPEKKYGLWTLIKLIGSFNKKEVHFMLIGLIFSIICGGGNP
TTAVFFAKQIVTLIVPVTDENRDQIKSDSDFWSLMYLMLALVQLLAFATQGILFAKCSER
LVHRVRDRAFRTMLRQDVAFFDKDENTAGALTSFLSTETTHVAGLSGVTLGTLLMVTTTL
VAALALSIAIGWKLALVLRIRPRRASPPEDISAIRTVASLTREQDVLDMYKKSLAEQQRR
SLRSVLKSSSLYAGSQSLTFLAFALGFWYGGTLIASREYNMFQFFVCFSAIIFGAQSAGS
IFSFAPDMGKAHQAAGELKTLFDRKPTIDTWSTEGESLESVDGTLEFRDVHFRYPTRPEQ
PVLRGLNLTVRPGQYIALVGASGCGKSTTIALLERFYDPLAGGIYIDGKEISTLNVNNYR
SFIALVSQEPTLYQGSIRENILLGTPHEATDEAIEFACREANIYDFIVSLPDGFNTVVGS
KGALLSGGQKQRIAIARALIRDPKILLLDEATSALDSESEHVVQAALDKAAKGRTTIAVA
HRLSTIQKADVIYVFDQGRIVEQGTHTELMRANGRYAELVNLQSLEKHA
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacccgccaccagaaaagcccatcgcgagcggcaccgcttcctcgcaaggggac
tcgacggaaatagaagcgcattcacacaccaacgagaaggctgctaccgacaagaatgac
ctcgagaaagccgacagcaaggttgcgaccccgcccgaggccgcatcccaagaggatccc
ttcaagcacctgcctgatgacgaggcagccgtgttgaagcgccagatcatcacccccgag
gtcaaggcgggcgtggcggcgctctacaggtactcctcgaccaacgacatcatcatcatc
atcatctccaccctttgtgccattgctgcaggtgccgccctgccgctcatgactgtcatc
ttcggcaatctgcagaatgtattccaggactacttcgtccaccggaatatgtcccatgac
gacttcacggacgagcttgccaagctagtcttgtactttgtttatctggccatcggcgaa
ttcgtcgtcagctacatctcgaccgtcggcttcatctacacgggtgagcacatcagtgcc
cagattcgcattcactatctcgagagctgcatgcgccagaacattggcttcttcgacaac
ctcggctccggagaggtcacaacgcgcatcacggccgacaccaacctgatccaggacggc
atgtccgagaaggtctcgctgaccattgccgcactcgccacgttcatcgccgccttcgtc
atcggcttcatcttctactggaagctgactctcatcctcttctcgaccgttgtcgccctc
gtcctcgtcatgggcggtggatcgacgttcatcatgaagttcaacaaacagtccattgac
tcgtacgcccagggtggcagcttggccgacgaggtcatcagctccatccgaaatgccatc
gcgtttggcacccaggaccgcctggccaagcagtacgatgttcatctcgtcaaggccgaa
tttttcggcttccgagtcaagggagccatcggctgcatggtcgcagctgtcgctgccgcc
gccaagatttacaacaccatcgaccgcgtgtcgcccctggatccttctcttgacactggc
gacaggctcgagaagctggagggcaccatcacgcttaagggcattaagcacatttacccc
tcgcggcccgaggtcgtcgtcatgcaggacgtttccttgaccattcccgccggcaagacg
actgccttggtcggcgcctcgggttctggtaagagtacgattgttggacttgtcgagcgc
ttctatgaccctgtccagggatccgtctacctggacggacatgatatcgccaagctcaac
cttagatggcttcgccagcagatggcccttgtgagccaggaaccaacgttgtttggcacg
accatcttccacaacattcgtcatggcctcatcggtacccagcatgagaacgagtctgaa
gaaaagttgcgtgagcttgtcatcggagctgcaaagaaggccaatgcccatgatttcatc
actagccttcccgagggatacgagacaaatgtcggcgagcgcggtttcctgttgtctggc
ggccagaagcagcgtattgctattgctcgtgccattgtctctgaccccaagatccttctc
cttgacgaagccacctcggccctcgacaccaagtcggagggcgtcgtacaagctgccctc
gaggtcgccgccgaaggtcgcaccacgattaccattgctcatcgactttcaacgatccgt
gacgctcacaatattgtcgtcatgtccgaaggtcgcattgtcgagcagggaactcacgac
gagcttcttgaactgaacgccgcctactacaatctcgtcaccgcccagaacattgccgcc
gtgaacgagatgacccccgaggaggcggcagccatcgacgaaaaggatgaacagctgata
cgccaagcctcccgatccaaggaaggctacgtgcatgatccgcaagacgacatcaacctc
aatcgcaccaccaccaccaagtcagcttccagcgttgctcttcagggcaagcagcccgaa
ccggagaagaagtatggtctctggacactgatcaagctcattggctccttcaataaaaag
gaggtgcacttcatgctgattggattgatcttttccatcatctgtggaggtggcaaccca
acgacggccgtattctttgccaagcagattgtcacgctcatcgtgcctgtgacggatgag
aatcgcgaccagatcaagtccgactcggacttctggagtctcatgtatctgatgcttgct
ctggttcagctcctcgcgtttgcgactcaaggtatcctgttcgccaagtgctctgagcga
ctcgtccaccgggtcagagaccgcgctttccgcaccatgctgcgccaggatgttgccttc
tttgacaaggacgagaacacggccggcgcactgacgtctttcttgtcgaccgagaccacg
cacgtggcagggctgagcggtgtcacactgggtaccctgctcatggtcaccactacgctt
gttgcggcactggcgctgtctattgccatcggctggaaactcgccctcgtgctgcgtatc
cgacctcggcgagcttcgcctcctgaggacatctcggccatccgcaccgttgcgtctctc
acccgcgagcaggacgtcctcgacatgtacaagaagtcactggccgagcagcagcgacgc
agtctgcgatccgtcctcaagtcgagctcactctacgctggctctcagtctctgacgttc
cttgctttcgcccttggtttctggtacggtggcacactcatcgccagccgcgagtataat
atgttccagttcttcgtctgcttttccgctatcatcttcggtgcgcagtcggctggatcc
atcttctcttttgcgcccgatatgggcaaggcgcatcaggcggcgggcgagctgaagaca
ctctttgaccgcaagccgaccattgacacttggtccacggaaggcgagtcgctcgagtcg
gtcgacggcacgctcgagttccgcgatgtgcacttccgctacccgacgaggccggagcag
cccgtgctgcgtggccttaaccttaccgtacgccccggtcagtacatcgcgcttgttggc
gcttcgggctgcggcaagtcgacgacgatagcccttctcgagcgattctatgacccgctc
gcaggcggcatttacattgacggcaaggagattagcacgctcaacgtgaacaactaccgt
tccttcatcgcgctcgtcagtcaagagcctacactgtaccaaggctcaattcgcgagaac
atcctgctcggcactccccacgaggccacggatgaggccattgagtttgcatgccgtgag
gccaacatctacgacttcatcgtgtctttacccgacggcttcaacacagttgtcggcagc
aagggtgcgctcctgtcgggtggacagaagcagcgcattgcgattgcacgtgcattgatc
cgagacccgaagatcctgctactggacgaggcgacgtccgcgttggactcggagtcggag
cacgttgtgcaggcagccctcgacaaggcggccaagggacggacgacgattgccgtcgcg
cacaggctgagcactatccaaaaggcggatgtaatctatgtattcgatcagggacggatc
gtagagcagggtacacacacggagctcatgcgggcgaacggccggtacgccgagctggtc
aacctgcagagcctggagaagcatgcttaa
DBGET
integrated database retrieval system
