Verticillium alfalfae: VDBG_02793
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Entry
VDBG_02793 CDS
T02227
Name
(RefSeq) hypothetical protein
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
val
Verticillium alfalfae
Brite
KEGG Orthology (KO) [BR:
val00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
val03009
]
VDBG_02793
Enzymes [BR:
val01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
VDBG_02793
Ribosome biogenesis [BR:
val03009
]
Eukaryotic type
Other ribosome biogenesis factors
VDBG_02793
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NSUN5_N
NSUN5_fdxn-like
Motif
Other DBs
NCBI-GeneID:
9533689
NCBI-ProteinID:
XP_003006654
UniProt:
C9SEU1
LinkDB
All DBs
AA seq
550 aa
AA seq
DB search
MSLYHETAEILSAPSTSGGSLRSRIFAKKGLKSPPAQVYALATETCKWSEVLKEVIEKTD
LLRHERKLTPILALLLVHDFLLAKSGIALPQTHGLRSAIDRHKARLTSEMTRARLRRKAP
TLEALRADINLAADPEGRHPRWVRINAVRTDLETQLSTTFKDFTRVMSIADVAASTMASR
SLYLDEHVPNLVAVSPGIDLTKTQAYHDGEIILQDKASCFPAYLFDPRAENGDIIDSNDK
RALTLEKMVKTAGSNKMTRIGMGQDFTGVDPKASLYANVGALLLDPSCSGSGIVGRDSMP
KLHLPEGPVGAGPRKGPAKPSPPVAAAEGKKRKRQETDEAQAKAVLVDDDGNTTEVASEQ
DLQKRLDALSGFQLTLLLHAMKFPPPKRVTFSACSIHAEEDGARRRQGAAVGRGKEAGWR
ILPRETQVSGMREWPVRGDVEAAGGDEKVAEACIRAHEGDGRGVMGFFVAAFERVGSLLD
SDDGPYLRDEHGVIIRDVTGMPVEKATGEVVAFDDPKEEESDDHDYAEESESGSTDGLEQ
DGEEKWGGFD
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgtctctataccacgagacggccgagatcctctcggcgccatccacaagtggtggcagc
ctcagatcacgcatcttcgccaagaagggtctcaagtcgcccccagcacaggtttatgcc
ctcgcaacagagacgtgcaagtggagcgaggtcctcaaggaggtcatcgagaaaacggat
ctcctgcgccatgagcgcaagctcactcccatcctagctctgctgctggtccatgacttt
ctcctggccaagtctggcatcgccctcccgcagacgcacggcctccgctctgccattgat
cgccacaaggcccgcctgacgtccgaaatgacgcgcgcccgcctgcgtcgcaaggcgccg
actctcgaggctctacgggccgacatcaacctcgccgccgaccccgagggccgccacccc
cgctgggtccgtatcaacgccgtgcgcaccgacctcgagacgcaactgtccacgaccttc
aaggacttcacccgcgtcatgtccatcgccgacgtcgccgcctccaccatggcgagccgc
tccctctacctcgacgagcacgtgcccaacctcgtcgccgtctcccccggtatcgatctc
accaagacgcaggcctaccacgacggcgagatcatcctgcaggacaaggcctcgtgcttc
ccggcctacctcttcgacccgcgcgctgaaaacggggacatcatcgattcgaacgacaag
cgcgccctgacgctcgaaaagatggtcaaaacggccggcagcaacaagatgaccaggata
ggcatgggccaagactttacgggcgtcgaccccaaggccagcctctacgccaacgtcggc
gccctgctgctcgaccccagctgctccggcagcggcatcgtcggccgcgacagcatgccc
aagcttcacctgcccgagggccccgtcggcgctggcccccggaaggggccagcgaaaccg
tcaccccccgtggccgcggcggagggcaagaagcgcaagaggcaggagacggacgaggcg
caagccaaggcggtgctcgtcgacgacgacggcaacacgaccgaggtggcgtcggagcag
gacctgcagaagaggctcgacgcgttgtccgggtttcagctcacgctgctgctgcacgcc
atgaagtttcccccccccaagcgggtcacgttctcggcctgctccattcacgccgaggag
gacggagcacgtcgtcgtcaaggcgctgcagtcggccgtggcaaggaggcgggctggcgc
atcctgccgcgggagacgcaggtcagcggtatgcgggagtggcccgtccgaggcgacgtc
gaggctgctggcggcgacgagaaggttgccgaggcctgcatacgagcgcatgagggcgac
ggcaggggcgtcatgggtttcttcgtcgcggcgttcgagcgggttgggtcgttactcgac
agcgacgatggcccgtatctgagggacgagcatggcgtcattatcagggatgtcacgggg
atgcccgttgagaaggccacaggagaggtcgtcgcctttgatgacccgaaggaggaagaa
agcgatgaccacgactacgcggaggaaagcgagagtgggagtaccgacgggcttgagcag
gacggagaggagaagtggggtggattcgactag
DBGET
integrated database retrieval system
