KEGG   Verticillium alfalfae: VDBG_02811
Entry
VDBG_02811        CDS       T02227                                 
Name
(RefSeq) hypothetical protein
  KO
K14324  histone deacetylase complex subunit SAP18
Organism
val  Verticillium alfalfae
Pathway
val03013  Nucleocytoplasmic transport
val03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:val00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    VDBG_02811
   03015 mRNA surveillance pathway
    VDBG_02811
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:val03019]
    VDBG_02811
   03036 Chromosome and associated proteins [BR:val03036]
    VDBG_02811
Messenger RNA biogenesis [BR:val03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     VDBG_02811
Chromosome and associated proteins [BR:val03036]
 Eukaryotic type
  Histone modification proteins
   HDAC complexes
    Sin3A-HDAC complex
     VDBG_02811
SSDB
Motif
Pfam: SAP18
Other DBs
NCBI-GeneID: 9532814
NCBI-ProteinID: XP_003006672
UniProt: C9SC87
LinkDB
AA seq 227 aa
MASHQADREDMAPPDEFAARALPPSLDLYTWPSCTLDELAHQLAAERPTLLPDPAVGTRL
AFRLIFPDARSMDNASHTAPRFMVKDLGSVVIGDGGPGLDMAAADDDTDMADRVSPVRQR
GGIREGLRTLEGSKFVVGDYVSCAILPPLPDGAVAPEPTRHIRAGPSGGPPTHHGRRDLG
SGRGRDWGAGGFPHGVPHGEWRRGEALPDGPDRGAWGRGRHAGRGGR
NT seq 684 nt   +upstreamnt  +downstreamnt
atggcgtcgcaccaagccgaccgcgaggacatggcaccgccagacgagttcgccgctcgc
gccctcccgccctctctcgatctctacacctggcccagttgcaccctcgacgagctcgcg
catcaacttgccgccgaacgccccacccttctcccagacccggcggtcggaacacgactc
gcctttcgcctgatcttccccgacgcgcgcagcatggacaacgccagccacaccgctcca
cgcttcatggtgaaggacctcggcagcgtcgtcatcggcgatggcgggccgggcttggac
atggctgctgcagacgatgatacggacatggcagacagggtctcgcctgtgcggcagcga
ggcgggatcagggagggcttgcggacgctggagggctcaaaattcgtcgtcggcgattat
gtctcgtgcgctattctgccgccgctaccagatggtgccgtggcgccggagccgacccgt
catattcgcgcaggaccctcgggcggtcctccgacgcatcacggacgacgtgacctgggg
tcggggcgggggagagattggggggcgggcgggttccctcacggcgtccctcacggcgaa
tggagacgcggtgaggccctgccagacggacctgaccgcggcgcctggggcagggggagg
catgcaggcaggggcggccgctga

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