Verticillium alfalfae: VDBG_03077
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Entry
VDBG_03077 CDS
T02227
Name
(RefSeq) hypothetical protein
KO
K14801
pre-rRNA-processing protein TSR4
Organism
val
Verticillium alfalfae
Brite
KEGG Orthology (KO) [BR:
val00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
val03009
]
VDBG_03077
Ribosome biogenesis [BR:
val03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
VDBG_03077
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDCD2_C
Motif
Other DBs
NCBI-GeneID:
9533088
NCBI-ProteinID:
XP_003006938
UniProt:
C9SD03
LinkDB
All DBs
AA seq
433 aa
AA seq
DB search
MPSYDSDSDVDDAKSFTETSVLLGYASKDAGEDSISRLGGSPEWLNPDVAPSASLARCKV
CNEMMVLLLQLNGELPEKFPGHDRRLYVFSCRKQGCRRKQGSIRAIRGTKISKEAAASAA
LAKEAKAAEDARKKAEASKPKNDGPGLGEALFGAKPGASGANPFASSANPFSSNSASASA
SANANPFSSGPSNPFTSPPAAPKPDAPKAGPPKAEEVTPKELSKTFAETLSLNNTQKPVG
PPPAPEPWPQAARLPKPYPVSYLAEADYEILEPEAPTVPQNVSMDVDDATADSGPGSGMD
KEVFESSMDAIFQKFADRLAQNPDQSIRYEFGGQPLIYSKKDAVGKVLTAAAAVGRSGMP
GCGNCGAGRVFEVQLTPQAITELESEELGLEGMDWGTIIVGVCESDCQEKTVGGGEAGYL
EEWCGVQWEELQQ
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgccttcgtacgacagtgattccgacgtcgatgacgccaagtcattcactgaaaccagc
gttcttctcggctacgcatccaaagacgcaggcgaagactctatcagtcgtttgggtggc
tccccagaatggcttaaccccgatgtagcgccttctgccagccttgcaagatgtaaggtg
tgcaacgagatgatggtccttcttctccagctcaacggcgagctccccgagaaattccct
ggccacgaccgtcgcctctacgttttctcctgccggaaacagggctgccgtcgtaagcaa
ggaagtattcgcgctatccgaggtacaaaaatatcaaaagaggctgctgcctctgcggca
ctcgcgaaagaagcgaaagcagccgaggacgctaggaagaaggccgaggccagcaaacca
aagaatgacggccctgggttgggagaagccctcttcggtgctaagccaggcgcatcgggc
gccaaccccttcgcttcatccgcgaatcccttcagcagtaacagcgcgagcgcgagcgcg
agcgccaatgccaaccctttcagctccggaccatcgaaccccttcacctctccgcccgcg
gcgccgaagcccgatgcgcccaaggcaggacctcccaaggctgaggaggtgacgcccaag
gaactttccaaaacctttgccgaaaccctgtccctcaacaacacacaaaagccagtcggc
cctccacctgctcctgaaccctggccacaggccgcgaggctgccgaaaccttaccctgtt
tcgtaccttgctgaagcagactatgagatcctggagcccgaggcaccgactgtgccgcag
aatgtgagcatggatgttgacgatgccactgctgattcaggccccggatcaggtatggat
aaggaggttttcgagtcttctatggacgccattttccaaaagttcgcggatcgcctggcg
cagaacccggaccagtcgatcagatatgaatttggcggtcagccacttatctactccaag
aaggatgctgttggtaaagtcctcaccgcagctgcagccgtgggtcgaagcggaatgccc
ggatgcggcaactgcggtgctgggagggtgtttgaggtgcagttaacgccacaggccatc
actgagctcgaatcggaagagctggggcttgaaggcatggactggggcacgatcatcgtt
ggcgtgtgcgagtcagactgccaggagaagaccgttggggggggagaagctgggtacctg
gaggaatggtgtggtgtgcaatgggaggaactacagcagtaa
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