Verticillium alfalfae: VDBG_03096
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Entry
VDBG_03096 CDS
T02227
Name
(RefSeq) opaque-specific ABC transporter CDR3
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
val
Verticillium alfalfae
Pathway
val02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
val00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VDBG_03096
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
val02000
]
VDBG_03096
Transporters [BR:
val02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
VDBG_03096
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_CDR
ABC2_membrane_7
ABC_trans_N
AAA_29
AAA_21
AAA_25
AAA_16
RsgA_GTPase
AAA_22
ABC2_membrane_3
AAA_18
AAA_28
Motif
Other DBs
NCBI-GeneID:
9533108
NCBI-ProteinID:
XP_003006957
UniProt:
C9SD22
LinkDB
All DBs
AA seq
1256 aa
AA seq
DB search
MEAITPDQQTLAADTDNETGDYSFKSPPPPVASSSAWHMASEVHERKNNDESGGEKPRRL
GVTWDSLTVRGISSDATFNENVVSQLYPFHKKSKDAPLKTIIHNSHGCVKPGEMLLVLGR
PGSGCTTLLIPNVLPPGINSAEEYVQAEKDFLLRSVGISHTAHTKVGDAFMRGVSGGERK
RVSILECMTTRASVFCWDNSTRGLDASTALEWIKAIRVLTDVLGLTTIVTLYQAGNGIYE
HFDKVLVLDEGQQIFYGPRVDAVPFMESLGFVRDSGSNRGDFLTGVTVPTERVIAPGFED
KFPRTAHDIHAAYEGSRVRSKMLEEIETYPQSTEAAENTAVFKESVAREKHRGVPQKSAV
TTGLLTQIRAAVTRQYQIMWGDKATLILKQVATVVQALIGGSLFYNAPDNSAGLFLKGGA
LFFSILYNALIALSEVTDSFTGRPILAKHRSFALYHPAAVVLAQIAADFPILLFQIDCVG
PYIIPSGPGYTDGRGGQSCTRVGGAVPGDTSVTGDAYLAHMSFSHSHVWRNFGIVIAWWV
LFVAATIFFTNRWKQMGEGGRSLLIPREQQHKSKHLLEGASDAEGGAKEKTSPKSGAESP
SGSVGKELIRNESIFTWKNLTYTVKTSDGDRVLLDNVQGYVKPGMLGALMGSSGAGKTTL
LDVLAQRKTEGTIHGSVLVDGRPIPISFQRSAGYVEQLDIHESLATVREALEFSALLRQS
RYTPDEEKLRYVDTIIDLLELRDLEHTLVGRPGAGLSVEQRKRLTIAVELVSKPSILIFL
DEPTSGLDGQAAYNTIRFLRKLAAAGQAILVTIHQPSAQLFTQFDTLLLLAKGGKTVYFG
DIGENASTVKSYFSRFGAHCPPDANPAEHIVDVVSSTPSSGVVQDWNKHWLESPEHDALS
VEIDRMVEDAAARPTGTVDDGHEFAASMWTQTKLVTQRMNISLFRNIDYLDNKFAMHISL
ALLNGFTFWSIGDSLTDLQQNLFTIFNFIFVAPGVISQLQPLFIDRRDIYEAREKKEQDV
PLGAVRHRPHRLRVSLPAHLRSALLRLLILYELLYTGIGQAIAAYAPNAVFASLVNPLVI
TTLVSFCGVMVPYSQIEDFWKYWYVPNNPKLSLHPSAGRLIPARARDRMYYLDPYNYLMS
SLLVFTTWDKPVRCRPSELAVFDPPANETCGEYLAAFQQTAMGRGANLLNPDATAGCEVC
QYTEGGDYLRTLNLEEKYFGWRNAAIVVIFCIGFYALVYIMMKLRTKATKKADGKK
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atggaggccatcactccagaccagcaaacgctggccgccgacacggataacgaaaccggg
gactacagcttcaagtcgccgccaccacctgttgccagcagctcagcatggcacatggcc
tctgaagtacacgagaggaaaaataacgatgagtcaggcggagagaagcctcgaagactc
ggtgtaacctgggacagcctcacagtcaggggcatcagcagcgacgccacgttcaacgaa
aacgtcgtttctcagctatatcccttccacaagaagagcaaggatgctcctttgaaaact
atcatacataactcgcacggttgcgtcaagcccggagagatgctcctcgttctcggacga
cctggctctgggtgcacaacgctcctcatcccgaacgtcttgccccccggtatcaactct
gccgaggagtatgttcaggccgaaaaagactttcttctgcgttccgtcggcatttcccac
accgcccacacaaaggtcggagacgcattcatgaggggcgtttctggaggagagagaaag
cgcgtttcgattctggagtgcatgacgacccgcgccagcgtgttctgctgggacaactcg
acgagaggccttgatgctagcacggcgcttgaatggattaaggcgatcagggtgctgacc
gacgttcttgggctcaccacaatcgtcactctttaccaggccggaaatggcatttatgag
catttcgacaaggtactcgtcctcgacgagggccaacagattttctacggtccccgagtc
gacgctgtgcccttcatggaaagcctcgggtttgttcgagactccggctcgaaccgcggt
gatttcttgactggtgtgacggttcctacggagcgcgtcattgctcctgggttcgaagac
aagtttcctcgtacagcccacgacattcacgctgcatacgagggctcgagagtgaggtcc
aagatgctcgaagagattgagacctacccccaaagcaccgaggctgccgagaacaccgcc
gtcttcaaagagtctgttgctcgtgagaagcaccgcggagtgccgcaaaaatctgccgtc
actaccggcctcctcactcagatcagggctgctgtaacgaggcaataccagatcatgtgg
ggagacaaggccaccctgattctcaagcaagtcgctacggttgttcaggcactcatcggt
ggctccctcttctacaacgcccctgacaattcggccggcctcttccttaagggcggcgcc
ttattcttctccatcttgtataacgccctcattgcactctcagaggtcaccgactcgttc
acgggcaggcccatcctcgccaagcatcgctctttcgccctgtatcacccggcagctgtc
gttctcgcacagatcgcagccgacttccccattcttctcttccagattgattgcgtcggc
ccctacatcattccgagcggtcctggctacacagacggccgaggaggacaatcctgcacc
agagtgggcggtgctgtgcctggtgacacctccgtcacgggtgatgcctatctcgcccac
atgtcgttcagccatagccacgtctggcgcaactttggtatcgttattgcatggtgggtg
ttgttcgttgccgccaccatctttttcacaaacaggtggaagcaaatgggcgagggtgga
cgcagccttttgattcctcgtgagcagcaacacaagtctaagcatcttttggaaggcgcc
tcagacgctgagggcggagccaaggagaagacctcacccaagtccggtgctgagtcgcca
tctggcagtgtgggcaaggagctcatccgcaatgagagcatcttcacttggaagaatctt
acctacaccgtcaagaccagcgatggtgatcgtgtcctcctcgacaatgtgcaaggatat
gtcaagcctggtatgctcggagccctgatgggctcttctggtgccggcaagacgacactt
ctcgacgtccttgcgcagcgcaagactgagggaacgatccacggctctgttttggtcgat
ggccgcccgattcccatctctttccagcgctccgcgggttatgtcgaacagctcgatatt
cacgagtcgttggccactgtccgcgaggcccttgagttctcggctctcttgcgccagtcc
cgctacacgcccgacgaggagaagctgagatacgttgacacgattattgacctgctggaa
ctgagggacctcgagcacacgctggtcggccgccctggcgcaggcctctcggtcgaacag
cgcaaacgcctcactattgccgtcgagctcgtgtcaaagcctagtatcctgatcttcctt
gacgaacccacctctggtctcgatggccaggctgcatacaacaccatccgctttctccgc
aagctcgccgcggccggccaggctatcttggtcaccatccatcagccatccgcccagctc
ttcacacagttcgatacgctcctgctcctcgccaaggggggtaagacggtgtactttggt
gatatcggcgaaaacgccagcaccgtcaagtcctatttctcccggttcggagcgcactgc
ccgcccgatgctaacccggccgagcacattgtcgacgtcgtttctagcacgccgagctct
ggtgtcgtccaagactggaacaagcactggctcgagtcgcccgagcacgacgccctctcg
gtggagatcgacaggatggtcgaggacgcggcggctcggcctacggggaccgtcgacgac
ggccacgagtttgcggcgtctatgtggacgcagaccaagctcgtcacgcagcgcatgaac
atctcgctcttccgtaacattgactacctcgacaacaaattcgccatgcacatcagtctc
gctctcctcaacggctttaccttctggtccatcggcgacagcctcacggacctgcagcag
aacctcttcaccatcttcaacttcatcttcgtggcccccggtgtcatctcgcagctgcaa
cccctcttcatcgaccgccgcgacatttacgaggcgcgcgagaagaaagagcaagatgta
ccactgggcgccgttcgtcaccggcctcatcgtctccgagtttccctacctgctcatctg
cgctctgctctactacgtctgctgattctgtacgagctgctctacaccggcatcggccag
gccatcgccgcctacgcgccgaacgccgtcttcgcctcgctcgtcaacccgctcgtcatc
accacgctcgtgtccttctgcggcgtcatggtgccctacagccagattgaagacttctgg
aaatactggtacgtcccgaacaaccccaagctctcgctgcatccttccgcaggtaggcta
atccccgcgcgtgcgcgtgacaggatgtactacctcgatccctacaactacctcatgagc
tcgctcctcgtcttcacgacctgggacaagcccgtgcggtgccgcccctcggagctcgcc
gtcttcgacccgcccgccaacgagacgtgcggcgagtacctcgccgccttccagcagacc
gccatgggccgtggcgcgaacctgctcaacccggacgcgacggccggctgcgaggtgtgt
cagtacaccgagggcggcgactatttgcgcacgctcaacctggaagagaagtactttggc
tggagaaatgccgccatcgtcgtcatcttttgcattggcttctacgccctcgtctatatc
atgatgaagctgcggaccaaggcgacgaagaaggccgacggcaagaagtag
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