Verticillium alfalfae: VDBG_03116
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Entry
VDBG_03116 CDS
T02227
Name
(RefSeq) iron-sulfur clusters transporter ATM1
KO
K05662
ATP-binding cassette, subfamily B (MDR/TAP), member 7
Organism
val
Verticillium alfalfae
Pathway
val02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
val00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VDBG_03116
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
val02000
]
VDBG_03116
Transporters [BR:
val02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB6, 7 subgroups
VDBG_03116
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_16
SMC_N
AAA_22
AAA_21
AAA_14
RsgA_GTPase
MMR_HSR1
AAA_25
AAA_28
AAA_29
Zeta_toxin
AAA
ABC_ATPase
AAA_33
NACHT
nSTAND1
AAA_18
Septin
Rad17
Ras
AAA_30
NB-ARC
Motif
Other DBs
NCBI-GeneID:
9533129
NCBI-ProteinID:
XP_003006977
UniProt:
C9SD42
LinkDB
All DBs
AA seq
685 aa
AA seq
DB search
MAPAKHRLGSPCVPNPAHLCTAKKPKVAHGALNAAPALKTDKGTIPLKAPKPASPDPMAA
VDKSAQEQRKADWAIMKEMSRYLWPKDSFSTKLRVGVAVALLVGAKVLNVQVPFYFKSIV
DAMNVDVGAMGGTAVTIAGSMILAYGATRIGATVFQELRNAIFATVAQKAIRKVACNVFD
HLLRLDLSFHLSKQTGGLTRAIDRGTKGISFLLTSMLFHILPIGLEISMVCGILTWQYGA
QFAAITATTMLAYTAFTVWTTAWRTKFRRQANAADNKASTVAVDSLINYEAVKYFNNEQY
EVARYNAALTAYEKSSIKVATSLAFLNSGQNIIFSSALTAMMYLAANGVAAGTLTVGDLV
MVNQLVFQLSVPLNFLGSVYRELRQSLLDMETLFNLQKVNVSVKEQPDAKPLLLAKGGEI
KFDNVTFGYHPERPILRNLSVTIPAGKKVAVVGPSGCGKSTLLRLLFRSYDAQSGRITID
DQDIKSVTLDSLRRSIGVVPQDTPLFNDTIEHNIRYGDMSASRELVEAAAQRARIHEIIE
KFPDGYQTKVGERGLMISGGEKQRLAVSRLLLKDPPLLFFDEATSALDTHTEQALMANIN
SILREKSRTSVFVAHRLRTIFDADMIIVLKEGSVAEVGTHRELIDRGGLYAELWSAQETL
FNSDGTSAVESEELDQGRSVLREKK
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggctcctgcgaagcaccgtctcggcagtccgtgtgttccaaatccagcgcacctctgc
accgcgaagaaaccaaaagttgcgcatggagcgctgaatgctgcgcctgcgctgaaaacc
gacaaggggaccataccgctgaaggccccaaagcctgcttcgcctgatcctatggctgcc
gtggacaaatcggctcaggaacagcgcaaggctgactgggccatcatgaaggagatgtcg
cgatacctatggccgaaagacagtttcagcacgaaactccgcgtcggcgtggccgtagcg
ttgctggtcggcgccaaggtgctgaacgtccaagtgccgttctacttcaagagcattgtc
gatgccatgaatgttgatgtgggagccatgggcgggacggccgtcacaattgcggggagc
atgattctcgcctatggcgcgacgaggataggggccacagtattccaggagttgcgaaac
gccatcttcgccaccgttgcccagaaggccatccgcaaagtcgcctgcaacgtctttgat
cacttgctgcgccttgacctcagctttcacctctccaaacagactggtggcttgactcga
gccattgaccgcggtaccaaaggaatcagcttccttctgacgagcatgctgttccacatc
ctccccattggtctcgagatctccatggtctgcggcatcttgacgtggcaatatggcgcc
cagtttgctgccatcacggccaccaccatgctcgcttacacggccttcactgtgtggacg
acggcgtggcgcaccaagttccgcaggcaagccaatgccgccgacaacaaggcttcgact
gttgcggtcgactcgctcatcaactacgaggcagtcaagtacttcaacaatgagcagtac
gaggttgcgagatacaacgctgccctcacagcatacgagaagagctccatcaaggtcgcc
acgtcgttggcgtttctcaacagcggccagaacatcatcttctcgtcggcgctgactgcc
atgatgtatctggcggcgaacggtgttgccgcaggcaccctgacggtcggtgacctcgtc
atggtcaaccagcttgtcttccagctgtcggtgcctctgaactttctcggttccgtgtac
cgcgagctgagacaatcgcttctggacatggagactctcttcaacctgcaaaaggtcaac
gtgtccgtcaaggagcagcccgacgccaagcctctgctgctggccaagggtggcgagatc
aaattcgacaacgtcacgtttggctaccaccccgagagaccgatcttgagaaatctctct
gtcactatccccgccggaaaaaaggtagccgtcgttggccccagtggttgtggcaagtct
actctccttcgcctgctcttccgctcctatgacgctcagtcaggccgcatcaccatcgat
gaccaggacatcaagtcggtcactctcgactctctccgacgctccatcggcgtggtcccc
caagatacgcccctcttcaacgacaccatcgagcacaatattcgctacggcgacatgtcg
gcgtcccgcgaactcgtggaggcagccgcccagcgcgcgcgcattcacgagatcattgag
aagtttcccgacggctatcagaccaaggtcggtgagcgcggactcatgatctcgggcggc
gagaaacagcgtctcgccgtgagcaggctgctcctcaaggacccgccgctgctcttcttc
gacgaggccacgagcgccctcgacacgcatacggagcaggcgctcatggcgaacatcaac
agcatcctccgggagaagtcgaggactagcgtcttcgtcgcgcacaggctcaggaccatc
tttgacgccgacatgatcatcgtgctgaaggagggcagcgtggccgaagtgggaacgcac
agggagctgattgaccggggtggcctttatgccgagctgtggagtgcccaggagactctt
ttcaattccgatggaactagtgctgtggagagcgaagagctggaccaaggacgctctgtt
ctgcgcgagaagaagtaa
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