KEGG   Verticillium alfalfae: VDBG_03253
Entry
VDBG_03253        CDS       T02227                                 
Name
(RefSeq) exodeoxyribonuclease
  KO
K10746  exonuclease 1 [EC:3.1.-.-]
Organism
val  Verticillium alfalfae
Pathway
val03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:val00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    VDBG_03253
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:val03032]
    VDBG_03253
   03400 DNA repair and recombination proteins [BR:val03400]
    VDBG_03253
DNA replication proteins [BR:val03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    VDBG_03253
DNA repair and recombination proteins [BR:val03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Other MMR factors
     VDBG_03253
SSDB
Motif
Pfam: XPG_I XPG_N XPG_I_2 Spectrin_4 URO-D GLUCM-like_C
Other DBs
NCBI-GeneID: 9533276
NCBI-ProteinID: XP_003007114
UniProt: C9SDM4
LinkDB
AA seq 273 aa
MGVSGNTGPAPFNPALKASVTFETKDANKLAGETLGVDAYGWLHRGAIACALELAQGKPT
RKYVDFAMHRVRMLRHFGVTPYLVFDGDFLPSKAMTEGSRAKRRDDSKKLGMELLKAGKN
SQAFAEFQKSIDVTPEMARNLIDELKKIHVEYVVAPYEADSQLVYLERQGIIGGILSEDS
DLLVFGCKRLLTKLDQYGNCIEINRRDFAACREVSLTGWTDAEFRRMAILSGCDYLAGVS
NMGLKTAYRMVRQHKTPERLVRMMQFEAKHRCQ
NT seq 822 nt   +upstreamnt  +downstreamnt
atgggcgtctctggtaatacaggccccgcaccgttcaatcctgctctcaaggcatcagtt
accttcgagaccaaggatgctaacaaactcgccggcgagacgcttggtgtcgatgcctat
ggctggcttcatcgtggggccatcgcctgtgccctcgagcttgcccaaggcaagcccacc
cgcaaatatgtcgatttcgccatgcaccgtgtacgaatgctgcgccatttcggtgtcacg
ccttatcttgtcttcgacggcgacttcctccccagcaaagcgatgactgaaggctctcgt
gccaaacgcagagacgatagcaagaagctgggaatggaactgcttaaagccggcaaaaat
tcacaggcctttgcggaatttcaaaaatcgattgacgtaacccccgagatggctcgcaac
ctcatcgatgagctcaagaagatccacgtcgagtacgtcgtggcaccatacgaggctgac
tcgcagctcgtctacctcgaacgtcagggaatcatcggtggtatcttgtcagaagactct
gatctactggtgtttggctgcaagcgattgttgaccaagctcgaccagtacggcaactgc
atcgaaatcaaccgccgtgactttgccgcctgccgagaggtgtcccttactggatggacg
gacgcagagtttcgacgcatggccatcttgagcggctgtgattaccttgccggtgttagt
aatatgggcttgaagacggcataccgcatggttcgacagcacaagacacctgaacgtctc
gtccgcatgatgcagttcgaagcaaagcatcggtgtcaatga

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