Verticillium alfalfae: VDBG_03380
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Entry
VDBG_03380 CDS
T02227
Name
(RefSeq) A/G-specific adenine DNA glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
val
Verticillium alfalfae
Pathway
val03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
val00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
VDBG_03380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
val03400
]
VDBG_03380
Enzymes [BR:
val01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
VDBG_03380
DNA repair and recombination proteins [BR:
val03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
VDBG_03380
Prokaryotic type
VDBG_03380
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUDIX_4
HhH-GPD
HHH
Motif
Other DBs
NCBI-GeneID:
9533324
NCBI-ProteinID:
XP_003007241
UniProt:
C9SE24
LinkDB
All DBs
AA seq
424 aa
AA seq
DB search
MLQQTRVAVVIDYWNRWTAKWPTIQDLAAAEPDHVLSAWRGLGYYSRATRIHEAARLVVA
DDEMQGLLPQDVAELESKVPGVGRYTAGAISAIVFGHAAPMVDGNVLRVLSRQLGVFGNV
KTDKTTIDMLWAAADALVKAVASDGDTGGSSRDDQPPVSDRPGRWGQALMELGSTICTPK
PDCAQCPITASCRAYAEGLALADQSKAARVPDIEDPCTLCASFADSEAEPAVAEKSVKKG
AKQGTLSAFFNSSSTKAKSAPNIDSKPTQRQMETIVEHARKFPLKVVKKAVREEDTLVCA
IRRADGCFLLHKRPEKGLLAGLWELPSKILPDGAQTPSARVKMAKMHVASLLGKQASLKH
AGELGTVPWLFSHLKLTMHVHLFELAGPDPTSGGERWATSDEVEAESMGTGMRKCWALVQ
DHDV
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagcagacccgcgtcgccgtcgtcatagactactggaaccgctggaccgccaaa
tggcccaccatccaggacctcgcggccgccgagcccgaccacgtcctctcggcctggcgc
ggcctgggctactacagccgcgccacccgcatccacgaggccgcccgccttgtcgtcgca
gacgacgagatgcagggcctgctgccccaagacgtggccgagctcgagagcaaggtcccc
ggcgtcggacgctacaccgccggcgccatctcggccatcgtcttcggccacgccgcgccc
atggtcgatggcaacgtgctgcgcgtgctgagtcgacagctcggcgtctttggcaacgtc
aagacggacaagaccaccatcgacatgctgtgggctgccgccgatgccctcgtcaaggcg
gtcgccagcgatggcgacaccggcggcagcagccgtgacgatcagccccctgtgagcgat
cggccggggcggtggggacaggcgctgatggagctgggcagcaccatttgcacccccaag
ccggactgcgcgcagtgtcccatcacggcgagctgtcgcgcgtatgcagagggcctggcg
ctcgcagaccagtccaaggccgctcgtgtgccggacatcgaagacccgtgtacattgtgt
gcgtcgtttgccgattcagaggccgagcctgccgtggcagagaagtcggtcaagaaaggg
gcaaagcaagggactctgtctgccttcttcaactcgtcgtccacaaaagccaagagcgct
ccgaacatcgactcgaaaccgacgcaacgccagatggagaccattgttgagcatgcccgc
aagtttcctctcaaagtggtcaagaaggccgtgcgcgaggaagacaccctcgtctgcgcc
atacgccgagctgatggttgcttcttgctgcataagcggcctgaaaaggggcttctggcc
gggttgtgggagctgccttcgaaaatccttcccgacggagctcagactccgagcgcgcgt
gtcaagatggccaaaatgcacgtcgccagcctcctgggcaagcaggcgagcctcaagcat
gcaggcgaactgggtactgtgccctggctgttctcgcatctgaagctgacgatgcatgtc
catctttttgagttggctggtcctgacccgacttccggtggtgagcgttgggcgacaagt
gacgaggtcgaagccgagtcgatggggacaggcatgcgcaagtgctgggctctggttcaa
gaccacgacgtttga
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