KEGG   Verticillium alfalfae: VDBG_03436
Entry
VDBG_03436        CDS       T02227                                 
Name
(RefSeq) U3 snoRNP protein
  KO
K14557  U3 small nucleolar RNA-associated protein 6
Organism
val  Verticillium alfalfae
Pathway
val03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:val00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    VDBG_03436
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:val03009]
    VDBG_03436
Ribosome biogenesis [BR:val03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    VDBG_03436
SSDB
Motif
Pfam: U3_assoc_6 HAT_Syf1_CNRKL1_N HAT_PRP39_N HAT_PRP39_C TPR_14 Suf NRDE-2 TPR_CcmH_CycH amfpi-1
Other DBs
NCBI-GeneID: 9532166
NCBI-ProteinID: XP_003005483
UniProt: C9SFJ4
LinkDB
AA seq 366 aa
MAAAELFQLRKVVDQDQDGGCCRESSILLGEEEIRNIVQRRSDFEHRALAPGVQPTDFTN
YVAWEISLDALRVKRCERLKIRHVASQHATQARVLAIYERAVTKRPASKELWLDYLTYTE
RIRATKRWRRTMTRALRLMPRDAELWVLAGRRAAKNGDMGTARGYFMRGCRFCTVDGGLW
IEYARCEMEWLAKMERNRKDSKKGGRVGPLAGEQVAEGDAIMFNVGEDDLNDEDEGTAIM
PEPEAEEPVFDEKPPVRWSATQPWMVRYQWLFSTLQGNNRSSTTQPPSFSSTCSPSSPRC
RRNPCSSNMCWQSCKRTTRQRLQHGAATRAFRWWASILTRPTFPAVFEKPCPDSRSVWKQ
HQSLPC
NT seq 1101 nt   +upstreamnt  +downstreamnt
atggcggccgccgaactttttcaattgcggaaggttgtcgatcaagatcaagatggcggg
tgttgcagagaaagctcgattctacttggagaggaagaaattcgcaacattgtacagcgt
cgcagcgattttgagcaccgggcgcttgcaccgggcgttcaacctaccgacttcacgaac
tatgtcgcttgggaaatttcacttgacgccctgcgagtgaagcgctgcgaacgcctcaag
attcgtcacgtcgcttcgcagcatgccactcaggctcgggttctagctatttacgagcga
gccgtcacgaaacgccctgcatcaaaggagttgtggctcgattatctaacctacactgaa
cgaatcagggctaccaagaggtggaggaggactatgacccgtgccctgagacttatgcca
cgcgatgcagagctctgggtgctcgcaggacgcagggccgcaaagaacggcgatatgggt
actgcgaggggatatttcatgcgcggctgccgattctgcactgtagatggcggactgtgg
atcgagtacgctcggtgcgagatggagtggctggccaagatggagcgtaaccgcaaagac
agcaagaagggggggagggttggtcccttggcgggcgagcaagttgcagaaggcgacgcc
atcatgttcaacgttggagaagacgacttgaacgatgaagatgaaggcacagccatcatg
ccagagccggaggctgaagagcccgtttttgatgaaaaaccgccagtacgctggagcgca
acccagccatggatggtgcgataccaatggctattttcaacattgcaaggaaacaaccgt
tcttcaacgacgcaaccgccgagcttttcttcgacctgttcgccgtcttcaccaaggtgt
cggcgcaatccgtgctcatccaacatgtgctggcagtcatgcaagaggaccaccagacag
cggcttcaacatggggctgctacacgcgctttccgctggtgggcatcaatccttacacgg
ccgactttccccgcggtcttcgagaagccttgtcccgactcaaggtcggtttggaagcaa
catcagagtctaccatgttga

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