Verticillium alfalfae: VDBG_03436
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Entry
VDBG_03436 CDS
T02227
Name
(RefSeq) U3 snoRNP protein
KO
K14557
U3 small nucleolar RNA-associated protein 6
Organism
val
Verticillium alfalfae
Pathway
val03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
val00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
VDBG_03436
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
val03009
]
VDBG_03436
Ribosome biogenesis [BR:
val03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
VDBG_03436
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
U3_assoc_6
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
NRDE-2
TPR_CcmH_CycH
amfpi-1
Motif
Other DBs
NCBI-GeneID:
9532166
NCBI-ProteinID:
XP_003005483
UniProt:
C9SFJ4
LinkDB
All DBs
AA seq
366 aa
AA seq
DB search
MAAAELFQLRKVVDQDQDGGCCRESSILLGEEEIRNIVQRRSDFEHRALAPGVQPTDFTN
YVAWEISLDALRVKRCERLKIRHVASQHATQARVLAIYERAVTKRPASKELWLDYLTYTE
RIRATKRWRRTMTRALRLMPRDAELWVLAGRRAAKNGDMGTARGYFMRGCRFCTVDGGLW
IEYARCEMEWLAKMERNRKDSKKGGRVGPLAGEQVAEGDAIMFNVGEDDLNDEDEGTAIM
PEPEAEEPVFDEKPPVRWSATQPWMVRYQWLFSTLQGNNRSSTTQPPSFSSTCSPSSPRC
RRNPCSSNMCWQSCKRTTRQRLQHGAATRAFRWWASILTRPTFPAVFEKPCPDSRSVWKQ
HQSLPC
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgccgaactttttcaattgcggaaggttgtcgatcaagatcaagatggcggg
tgttgcagagaaagctcgattctacttggagaggaagaaattcgcaacattgtacagcgt
cgcagcgattttgagcaccgggcgcttgcaccgggcgttcaacctaccgacttcacgaac
tatgtcgcttgggaaatttcacttgacgccctgcgagtgaagcgctgcgaacgcctcaag
attcgtcacgtcgcttcgcagcatgccactcaggctcgggttctagctatttacgagcga
gccgtcacgaaacgccctgcatcaaaggagttgtggctcgattatctaacctacactgaa
cgaatcagggctaccaagaggtggaggaggactatgacccgtgccctgagacttatgcca
cgcgatgcagagctctgggtgctcgcaggacgcagggccgcaaagaacggcgatatgggt
actgcgaggggatatttcatgcgcggctgccgattctgcactgtagatggcggactgtgg
atcgagtacgctcggtgcgagatggagtggctggccaagatggagcgtaaccgcaaagac
agcaagaagggggggagggttggtcccttggcgggcgagcaagttgcagaaggcgacgcc
atcatgttcaacgttggagaagacgacttgaacgatgaagatgaaggcacagccatcatg
ccagagccggaggctgaagagcccgtttttgatgaaaaaccgccagtacgctggagcgca
acccagccatggatggtgcgataccaatggctattttcaacattgcaaggaaacaaccgt
tcttcaacgacgcaaccgccgagcttttcttcgacctgttcgccgtcttcaccaaggtgt
cggcgcaatccgtgctcatccaacatgtgctggcagtcatgcaagaggaccaccagacag
cggcttcaacatggggctgctacacgcgctttccgctggtgggcatcaatccttacacgg
ccgactttccccgcggtcttcgagaagccttgtcccgactcaaggtcggtttggaagcaa
catcagagtctaccatgttga
DBGET
integrated database retrieval system