Verticillium alfalfae: VDBG_03481 Help Entry VDBG_03481        CDS       T02227                                  Name (RefSeq) topoisomerase II   KO K12617   DNA topoisomerase 2-associated protein PAT1 Organism val  Verticillium alfalfae Pathway val03018   RNA degradation Brite KEGG Orthology (KO) [BR:val00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     VDBG_03481  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:val03019]     VDBG_03481 Messenger RNA biogenesis [BR:val03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     P-body specific factors      VDBG_03481   mRNA degradation factors    5'-3' decay     Decapping complex      VDBG_03481 SSDB OrthologParalogGFIT Motif Pfam:  PAT1 Motif Other DBs NCBI-GeneID:  9532212 NCBI-ProteinID:  XP_003005528 UniProt:  C9SFW8 LinkDB All DBs AA seq 759 aa AA seqDB search MSFFGFDATRHNNAAPGFSQAHDPFAGFVTNFDESGRCLSTTIPFGRRALRDSGPNNRGG APSVWQGFRLFFGQIAKCRMPLSRNNSFFSRQGLEPREPQAPENKFVCHCFLVSTTLASP VNLTAPPARTGYEKYREAEPIPDLHVDASLWGMPAKKFAPTPSPQPAYQPSSVPASGRKV MSLEEVEKAMREQTTVPGQHAGVENVHHPQHYAADHSDFYGHPEHAQHQYSYSAAEQQRA THSPAHPGHSHPVTILQRPQSKQPTPSAPSPQARQQQQQPPPVHPTQILQNPNRLSGSDQ AQAQAQQQHLAHLSEEEKAAFLDQETKRAKRNHKIWLLSKDNGLMTPQDKNFITRIQLQQ LVSATGNPTDVANEGALAEDFYYQVLSQIRGGQRQNPNQPLNNFAQTYLFQTGSRQGAMR RQGRAAENHVQRMEQQVQRAVEAAKNKPKNPQLVIAGSLGKISFSNSKTPKPLLNIKRTE SSGETQKPSNAKRALGGGALDQQAQALNAKLWSELKVHEPIREGTVHPFIAFLSFPKGKK VFSRVFRHISFEQRTTILTMIIFHLDSLDVVHGAQLTHGEKNLSAQKREDIELFSLAVMP SLFAYFNDTQIDIVTDVLSIITSKLNVDSIAKTRVGTSMLTLVLSRAELLKQAGGGNPQA WNEWDQVFGSFFNVIEPTLPHMFPGNVNAGEDVIVWQLLAAMGVSANPEQQQRLVLAVKD RVLSTVEHAKTLPGAMASQRLGTVNLFMHSIGLDVDLLQ NT seq 2280 nt NT seq  +upstreamnt  +downstreamnt atgtctttcttcggtttcgatgcgacgcgccacaacaatgcggccccgggcttttctcaa gcccacgaccccttcgccggctttgtgaccaactttgacgaaagtgggcgatgcctttca acgacgattccctttgggcggagggctttgagggacagcggtcccaacaacagggggggt gcgccctccgtttggcaaggatttcgacttttttttggtcaaattgccaagtgccggatg ccattgagtaggaacaattcctttttcagtcgtcaaggcctggaacctcgagaacctcag gcgccggaaaataaattcgtctgccattgcttcctggtatctactactctagccagccca gtcaatcttacggcaccccctgcccgaactggctacgagaaatatcgcgaagctgagcca attcccgatcttcatgtcgatgcctcgctttggggaatgcccgccaagaagttcgcgccc acgccctcgccacagccggcgtaccagccctcttccgtcccagcatctggacggaaggtc atgagcctggaggaggttgagaaggcgatgcgcgagcaaacaacagtgcctggacagcac gctggtgtcgaaaatgttcaccacccgcaacactatgctgccgatcacagcgacttctac ggacaccctgaacatgctcaacaccagtattcgtactctgcagccgaacagcagcgtgct acccattctcctgcccaccccggccatagccaccctgttaccatcctccagcgccctcag tcaaagcagcctacccctagcgccccgagcccgcaagctcggcagcaacagcagcagccc ccgcctgtccacccgacccagattctccagaacccgaatcgactttctggctcagaccaa gcgcaagcccaggcccagcagcagcacttggctcacttgtctgaagaggagaaggcagca ttcctcgaccaagagacgaagcgagccaaacgtaaccacaagatctggctcctgtctaag gataatggtctcatgacgccgcaggacaagaatttcatcactcgtattcagctacagcag cttgtatccgccactggaaaccccacggatgttgcgaacgagggtgccctagctgaggac ttttattaccaggttctcagccagatccgcggtgggcaacgtcagaaccccaaccagccc ttgaacaactttgcgcaaacctatctcttccagactggcagccgccaaggtgcgatgcgt cgacagggtcgtgccgctgagaaccatgtgcagcgaatggagcaacaggtgcagcgggct gttgaagcggcaaagaacaagcccaagaaccctcagttggtcatcgctggcagccttggc aaaatctcctttagcaactctaagacgccgaagcctctcctaaacatcaagcgaacggag agctcgggtgagactcagaagccgagcaacgcaaagcgcgccctcggcggcggcgccctc gaccagcaggctcaagctctcaacgccaagctctggagcgaactcaaggtgcatgagcct attcgtgaggggactgtccacccatttatcgcgttcctgtctttccccaagggcaagaag gttttctcccgcgtcttccgtcacattagcttcgagcagcggacgaccatccttaccatg atcatcttccacctggactctctggacgtcgtccacggtgcgcagctcacccacggcgag aagaacctcagtgcccagaagcgcgaggatatcgagctcttctctctcgccgtcatgccc agcctgtttgcatacttcaacgacactcagatcgacattgtcacagatgtcctcagcatc atcacctccaagctgaatgtcgacagcatcgcgaagactcgcgttggaacctcaatgctc acccttgtgctgagccgcgccgaactgttgaagcaggctggtggaggtaatcctcaggca tggaacgaatgggatcaagtattcggcagcttcttcaacgtcattgagccgactcttcct cacatgttccccggtaatgtcaatgctggcgaggatgtcatagtgtggcagcttcttgcg gccatgggcgtcagcgccaaccccgagcagcagcagcgtctggtgcttgccgtgaaggat cgagtcctcagtaccgttgagcacgcaaagacgcttcccggtgccatggcctctcaacgt cttgggaccgtcaatctgttcatgcattcgattggattggatgttgatctcttgcagtaa

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