Verticillium alfalfae: VDBG_03636
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Entry
VDBG_03636 CDS
T02227
Name
(RefSeq) RINT-1 family protein
KO
K20474
RAD50-interacting protein 1
Organism
val
Verticillium alfalfae
Brite
KEGG Orthology (KO) [BR:
val00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
val04131
]
VDBG_03636
Membrane trafficking [BR:
val04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
NRZ (DSL1) complex
VDBG_03636
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RINT1_TIP1
COG4_C
Nuf2_DHR10-like
DUF3080
Motif
Other DBs
NCBI-GeneID:
9532371
NCBI-ProteinID:
XP_003005683
UniProt:
C9SGL0
LinkDB
All DBs
AA seq
858 aa
AA seq
DB search
MCVDIRRPQAWFERPCPAADQWETRLSPPGSQTTIVIPPRQALAPAQHTHPRTYTYRRTH
PRPSKHGRVNRATNPEGAQGLDIRVEDYLDDKLQSTTDLESLETLLANVETQRSQLQAQL
DNAVKQLDEARFTSRDRQTSLETRIQDFQELQHSIDIRVKVAAASDAPNQAIARLQEPMK
KLRTVELAQKYLVLLQEVDALRKEARSHLPESPKAALEPYAQLKQLSVRLAELSGIADDA
AVHLVNYVETVTETLWDEMKKTMSAELDAILTKRSWPMGVDPSAEMDDEWLQCFEKLIDL
QIPEVVYSTETVTLLPFDVMCKMFISEFRYHFMSDKPTSKPEALGTHCFPWFLATIEKWE
DFFRDNLGHMLAAKLKDTPAANNTAYIDPVCAFVTTMLPVLREKVHTVAADAVNVPTFLS
SLIGQLMTFDDNIRARFSYDGGNSEDGWAGLTTEVLDKYFEPWFVAEKEFALERFQAIMA
APDARNIDYDYTGSGKTKPTYGATRVTDLLRSITAQYERARNFKHKMRFLIGIQLDILDD
FHDRLRGSLEAYQSITSTVGRTLHGVTKEQLAALEGTGALETLCKVYGSSDHVVNTLKDW
SNEDFFVTLWDELQTRAKPGNESPEIAGEMSYEEVKDRTSTAVGSDNGDGILFDETIAAY
ALRRKAAQDFLVGALSKSHNDALKAYSTKVQWTTISDSGAEVDPFQLAITAELDEPLRIL
RQNLDFLVKALSTAAFRRTWRAALDKLQDFLWGEVLMRQTFTALGAAQFLRDLNAILSLV
DRYIPNGVGPLGSLHDALRLLNLPVEAQSAGGVSLKVATDRIFTDNTEAKKMLEALEIDS
LTPANARHILQRRLETNE
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgttgatattcgtcgtccccaggcctggttcgagaggccatgcccggctgcggat
caatgggagacccgcctttccccacctggcagtcaaaccaccatcgtcatccctccacgt
caagctttagctccagcacagcacacacacccacgcacatacacataccgacgcactcac
ccgaggcccagcaagcatggccgcgtcaatagagcaacaaaccccgaaggggcacaaggg
ctcgacattcgtgttgaagactacctcgacgacaagctccaatccactaccgacttggag
agcctcgaaaccctgctggccaatgtcgaaacccagcgcagccagcttcaggcgcagctc
gacaatgctgtcaagcagctcgatgaagctcgcttcacgtcccgcgaccgccagacatcc
ctcgagacgcgcattcaagactttcaggagcttcagcacagcatcgacatccgcgtcaag
gtcgccgccgcatcggatgcacccaaccaggcgatcgcccgcctgcaggagcccatgaag
aagctgcgcaccgtcgagcttgcgcaaaaatacctcgtcctcctgcaagaggttgatgcc
cttcgcaaggaggctcggtcgcatctgccagaaagcccaaaggcggcgctcgagccgtat
gcgcagctcaagcagctgtcggtacgcctggccgagctgtcgggcatcgcagacgatgcg
gctgtgcaccttgtcaattacgtcgagacggtcaccgagacactgtgggacgagatgaag
aagaccatgtcggctgagctggatgccatcctgacgaagaggtcctggccgatgggcgtg
gatcccagtgctgagatggatgacgagtggctgcagtgctttgaaaagttgatcgacctc
cagatccccgaggtcgtgtacagcacggaaactgtaacgttgctgccctttgacgtcatg
tgcaagatgttcatctccgaattccgataccactttatgagcgacaagccgacaagcaag
cccgaggctctgggaacgcactgcttcccgtggttcctggcgacgattgagaagtgggag
gatttcttccgggacaacctgggccacatgcttgccgccaagctgaaggacacaccggcg
gcaaacaacacggcctacatcgacccggtgtgcgcctttgtcacgacaatgctacctgtt
cttcgggaaaaggttcacactgttgcagccgacgctgtcaacgtgcctaccttcctgagc
agcctgataggccaactgatgacgtttgatgacaacattcgcgccaggttcagctatgac
ggaggcaactcggaggacggatgggctggtttgaccaccgaggtccttgacaagtatttc
gagccctggttcgtggcagagaaggaatttgcattagagcgattccaggccatcatggct
gcgccagatgcccgaaatatcgactacgactacacaggcagcggaaagacgaaaccgacc
tacggcgcgacccgcgtcactgatctgttgcgatccattaccgcgcagtacgagcgggcc
aggaacttcaagcacaagatgcgcttcctcatcggcatacagctcgacatcctcgacgac
tttcacgatcggctcagggggtctcttgaagcctatcaatccatcacatccaccgtgggc
aggacgctgcatggcgtgaccaaggagcagctggcggcgctggagggaacgggagctctc
gagaccttgtgcaaggtgtacggcagctccgaccatgttgtcaacacgctgaaggactgg
agcaacgaggacttcttcgtcacgttgtgggacgaactccagacgcgggcgaaacccggc
aacgagtctcctgagattgctggcgagatgagctatgaggaggtcaaggaccgaacctca
actgccgtcggatcggacaacggagacggcatcttgttcgatgaaacgatagccgcctat
gcgttgaggagaaaggcagcgcaggacttcctcgtcggggcgttgtccaagtctcacaat
gatgccctcaaagcatactcgacgaaggtgcaatggacgacaatcagcgatagtggcgcc
gaggtggatcccttccagcttgccatcacagccgagctcgacgaaccccttcgtattctt
cgtcaaaacctcgacttcctcgtcaaagctctcagcacagccgcgttccgacgcacttgg
cgcgcagccctcgataaactgcaggacttcctttggggtgaggtgctcatgcggcagacg
ttcacagcgctcggcgcggcgcagttcctgcgggacctcaacgccatcctgtcgctcgtc
gaccggtacatcccgaacggcgtgggcccgctgggcagcctgcacgacgcgctgcgactg
ctcaacctgccggtcgaggcgcagtctgccggcggcgtgtcgctcaaggtggcgactgac
cgcatcttcacagacaataccgaggcgaagaagatgctcgaggcgctcgagattgactcg
ctgacgcctgcgaacgcgagacacatcttgcagcggcggctggagacaaacgagtaa
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