Verticillium alfalfae: VDBG_03760
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Entry
VDBG_03760 CDS
T02227
Name
(RefSeq) sporulation protein
KO
K14552
NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)
Organism
val
Verticillium alfalfae
Pathway
val03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
val00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
VDBG_03760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
val03009
]
VDBG_03760
Ribosome biogenesis [BR:
val03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
VDBG_03760
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_EML_2
Beta-prop_WDR75_2nd
Beta-prop_WDR75_1st
WD40_CDC20-Fz
WD40_Prp19
WDR55
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
9532500
NCBI-ProteinID:
XP_003005807
UniProt:
C9SH57
LinkDB
All DBs
AA seq
968 aa
AA seq
DB search
MVGKTDKKPRAGDVDPNKKRKRDASDKQRSSDIKRNRKDEKQTTPKSDKRTSDANELKGN
ALKVLSELQNGETANTTIKTRDQSELQSAGESNGWKISSPLGGRIADIDPVFSSDAKNLI
LTYHTSIQVYSVADSLLVRRILLPIAKDNKDGPAASVLTTHLSPVEPDFVWVGCSDGRIW
KFNWRRGIKPEDTLITKSHTALDFCVSAIKVNEELHDVVFVSEKKQNDEGTIVAYCRKGA
SHLASQILFKTVRPDQAIHVLRATADGKYVVGAHSEGLVVGTITGKDLELEGDFFNFDTS
DIICTLDLRVTSRQQGLSTPKKQTVKPSSEVLDVIIGCGRGSIFLYNDIMTKLQSMRGPK
PKQKEVQARKFHWHRRAVRSVKWSRDVSGGSENTLVLWQVDTAITTYLPHLPGAIENIVV
SPSGAHYAVHLDDNSAMVISTSEMKPVTYVSGIQSAARYFAQPKDTLVKRVGEVSKEVRH
PIPAALSPLDATKLHVCVGTGQQAMMSGSQQSAPILQSFDLDSFTSVSKQALARTQPTDV
NITAQGNPISEPAITHIAFSSDARWLATVDDWSPPTGDIDNMSPDAKEHLVQERREIYLK
FWSVSAEDESLALTSRINSPHSTSRPETVLALAADPAAPRFATLGDDGLVRIWHFKTRQT
DGLTSKDTKGQSLQSWSCGLTVGMGSHVGADVIPAPEGHKAAKRSGSMSFSEDGSSLFVA
FGSRDDGTVYIVDTHTGETRMMLENMWKGDVRSLQVLSPYIVTLSNDLRVYDVVADELQY
GVKLPKRDASSVPAAFAHLQVDKKSRTFAMVVPFTYSSQIAVFKPEDPQPLCIETVPHRI
TSLVSSASSSGFVALDDAAQLWSVTEVSDQSAISLAKPLEDLRLDTTVEDDAINGDADED
DQASEIDFATDGDNMELDDDETHTAIVSRQKLAELFDAAPAFAMPSIEDMFYKVTGLLTT
KPLASTAA
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atggtcggcaagacagataagaagccccgcgcgggagacgtggacccgaataaaaagagg
aagcgtgacgccagcgacaaacaacgaagctccgacatcaagcgcaaccgcaaggacgag
aagcaaaccacgcccaagtcggacaaacgaacatcggatgccaacgaactcaaggggaat
gcgttgaaggttctgtccgagttgcagaacggcgagactgcgaataccaccataaaaacg
agagaccagagtgaactgcagtctgcgggcgagtccaacggctggaagatctcatcgcca
ttgggtggcagaatcgctgatatcgaccccgttttcagcagcgatgcgaagaacctcatt
ctcacataccacacttccattcaagtctactctgtagcagactctctcctcgtccgacga
atcctcctaccgattgcgaaagacaacaaagatggccctgctgcctcggttctcaccact
catctctcgcccgtggaaccagacttcgtctgggttgggtgctctgatggaaggatatgg
aaattcaactggagacggggtatcaagccggaagataccctgataacaaagtctcatact
gcactggacttctgcgtttccgcgatcaaggtcaacgaggaacttcacgatgttgtcttt
gtgtcggagaaaaagcaaaatgacgagggcaccattgttgcatactgccgcaagggcgct
tcccacctcgcatcccagattcttttcaagaccgtccgaccggaccaagcgatacatgtg
ctgcgcgccacggctgatggaaaatatgtggtcggtgcccactccgaaggcctagtggtc
ggaacaatcactgggaaggacctggaactagaaggcgacttcttcaacttcgacacaagt
gacatcatctgcactttggatctacgggtcactagccgtcaacaaggcctctcgacaccc
aagaagcaaactgtcaaacccagctcagaggttctcgatgtcattattggatgtggccga
ggctctatcttcttgtataacgacatcatgacgaagctgcagagcatgcgcggtcccaag
cccaagcaaaaagaggttcaggccaggaagtttcactggcacaggcgggctgttcgcagc
gtcaagtggtcaagagatgtctccggtggctccgaaaacacactcgtcctgtggcaagtt
gatactgccatcaccacgtatcttccccatcttcccggcgctattgaaaacatcgttgtg
tcaccgagcggcgcgcattacgcagttcaccttgacgataactcggcaatggtcatctcg
acctctgaaatgaagccggtcacgtacgtgtcaggaatccaatctgcagcccggtacttc
gcacagcctaaggatacactggtgaagagggtgggagaggtctcaaaagaagtccgccac
cctattccggcagctctcagccctctggacgcaacgaagctgcatgtttgtgtgggcacg
ggtcagcaggccatgatgtctgggtcacaacagtcagcacccattcttcagtctttcgac
cttgattcctttaccagtgtttccaagcaagcattagcaaggacacagcccacggatgta
aacattacggcgcagggaaatcccatttccgaaccggctatcacacacattgccttttcc
tcggatgcgcgatggctggcaacagtggacgactggtcgccgcctacgggagacatcgac
aacatgtcgcctgacgcgaaggagcaccttgtgcaagagcgtcgtgaaatctacctcaag
ttctggtcggtctccgccgaggacgaatccctcgctctcacttcacgcatcaattcgcct
cattccaccagcagacctgagaccgtccttgcgctggctgccgatcctgccgcgccacga
tttgcgaccctgggagatgacggcctggtccgaatctggcatttcaagacgaggcagact
gatggcctgacttcgaaagataccaagggtcaatctttacagtcttggtcttgcggcctt
acggttggcatgggcagccatgtcggggcagacgtgatccctgcccccgagggccacaag
gcagccaaacgaagcggtagcatgagcttttcagaagatggctcgtcgctgtttgttgcc
tttggaagccgggatgatgggactgtatacatcgtcgacacgcacactggcgagacacgt
atgatgctggagaatatgtggaagggcgatgtccgttcactgcaggttctctctccgtac
attgtcaccctgtccaacgaccttcgggtctatgatgtcgtggccgacgaactgcagtac
ggcgtaaagttgcctaagagggatgcttcctcggtgcctgcagcttttgctcatctacaa
gtcgataagaagtcccgcactttcgccatggtcgttccattcacatactcttcccagatt
gcggtcttcaagccggaggaccctcagcctctctgcatcgagacggtcccccaccgcatt
acgagcttggtgtcatctgcgagctcctcgggcttcgtagctctggacgatgctgctcag
ctctggagcgtcactgaggtttcggaccagtctgcaatctccctcgccaagcctctcgaa
gatctgcgtctcgacacgacggttgaggatgatgcgattaacggcgacgccgatgaggat
gatcaggccagcgagatcgattttgctacggacggagacaacatggagctggatgatgac
gagacacacaccgcgatcgtgagcaggcagaagctcgccgagctgtttgacgctgcgccg
gccttcgccatgccgtcaatcgaggacatgttttacaaggtcaccggactactgaccacg
aagccgctggcaagcactgctgcttag
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