Verticillium alfalfae: VDBG_03806
Help
Entry
VDBG_03806 CDS
T02227
Name
(RefSeq) hypothetical protein
KO
K11563
kinetochore protein Spc7/SPC105
Organism
val
Verticillium alfalfae
Brite
KEGG Orthology (KO) [BR:
val00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
val03036
]
VDBG_03806
Chromosome and associated proteins [BR:
val03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Kinetochore proteins
NMS complex
VDBG_03806
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spc7
Knl1_RWD_C
MELT_2
Fez1
TPR_MLP1_2
RasGAP_C
Motif
Other DBs
NCBI-GeneID:
9532546
NCBI-ProteinID:
XP_003005853
UniProt:
C9SHA3
LinkDB
All DBs
AA seq
1460 aa
AA seq
DB search
MSSSGDATVPATRRLRKSIGGQISSAKATEKENVTLDLGSSSLAANRKKSRSKSIGPGGL
DVLKNANGNRRANDTPPSAHVSQQDASSGAKVALRTEEEQQAKARQREERDRREARRKSL
ANRRVSFAAEATLHTFHEIDFMQEASRDSSRRASSKPSTNDKASSRTRTPQEQVDGLVPE
SPEDQRDAHQRKRRRSSALPAANYGDNDDPTMASSIYSSDSEPADAVEEIQDDEQEEDSN
SDDDSDVDDGTMMTVEDHEVTGASVMSAMSGRSGSSTGDSDTLEEALRMAARTAGTQKLG
LDDSEGEEEVIPSFGWIKKNSDKSDAPQDGKHAGHEPPSPPADDVDEDDGAMEMDMEMTQ
AVGGILPSPDDEQDDGELDMSMDVTRAIGGILSQPRDKIANPHEHGEEGEETMQMDETME
VTKALGGILRSVPDLEPDENEDMSMEITTAIGGLIPARNTNQATATRRRTMTSANSKNLD
DDTMDMDMTVGVGRILPSVTGAQGQDDGNATVGMDMTIGVGRILPAASNDEDNVEQDQTM
GMDMTVAMGSILKGPHVPESRSDAKRFMEEEVDKPDSPSKAGSIGVPPKSPAQRLAASTK
PTIMSAPGTPETNSFGGSALRRSLPRPGTATPQSSPLRTTPSPQKSTAQSRARARSKSAS
PTKATPSPFKPVSSPTRTPQSRTKQLGRSRLPDSKPATPSPVKSAKKNLDVFQQDPSTGA
RTPLVVLTPQTRRLSGVGADRAGLGSPKVAAIFDRRESLSDATQAFVPGQNRGVSFANPR
IMEFEVDNDREEEEEKENQRKILEREVDGQDDREATLNLKEMIQSMSPMRKPLKGRKSLH
VGSAKGLLGKRPFELSDDEEAEADDGVKRLKNHQGSPVKNVRLQQPPSKAETTGRRSLRS
SQKSLEDSTQEHQTPTLTALSSRDDGNATTPRGQTRFKDIEDDTATHPMDFERSPVKDES
SLQTDQGEDRIHLQEFLNMTSIRFMELTTTKRRHTQAPEAFKDGLIDDEGNFPLERCVVA
GACTVPMLELYQHSCRELKKYISEGRRIVREIETETFEDNPPLFREYMSATPEIKNVLDN
QFKNGKSHARLESKAMWYAWRTALQEGLKEGLIRIAEGMDADDKVLEQQQTLLSSILPIL
ISRFEALNEERINLEAVAQELADCDPSELEAVRSELADVDSDMEKKTKQIVQLRAQLEES
EATVEQLTARKRAWQEEIEEAEKIREECRGWSTSEISTLKARVDAIEKQHGWAISGIADS
TVSMTYRRSIELVFNISAFGSTQGKNSQIDLWYIATNGDGSPRTSSVEQEFFVQCIRDHV
RGLPQSRTKIVDLLHVIRAAWDRAVSTCDDIRRVNMTFPTSVTRTSDSSISVCSSLLLTA
IETRVEIVLGLRGVSTSDGLDFVIQPDARVVYGETFNTGKMGEFLTTHLGEKVVDRLADS
PSWNDVVVDLHERLIARGRK
NT seq
4383 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcttccggcgacgcgacagttccagctacgcgcagactgcgcaagtctattggc
ggccaaatatcgtcagccaaggctacagagaaagagaacgtgacacttgatcttggaagc
agttctcttgctgccaaccggaagaagtcgcgaagcaagagcattgggcctggtggcctg
gacgttctgaagaacgccaacggtaatcgaagagccaatgacacgccaccgagcgcgcac
gttagtcagcaagatgcatcctccggcgccaaagttgcgctgcgaacagaggaagagcaa
caggcaaaggcgcgacagcgcgaagaacgggaccgaagggaagcgcgccgaaagtcattg
gcgaatcgtagagtatcctttgcagccgaagcaacactacacacatttcacgaaatcgac
ttcatgcaagaggcatccagggattcatcccggcgcgcatcctcaaaacctagcaccaac
gacaaagcttcgagccgaaccagaacgccacaagagcaggttgacggtttggtgccagaa
tcaccagaagaccaaagggacgcccatcagagaaaacgaagaagaagctctgccctccca
gccgcgaactatggcgacaacgatgatcctacgatggcatcgtcaatatacagctccgac
tcggagcctgccgatgctgtggaagaaattcaagatgacgaacaagaggaggactccaac
tctgatgatgactccgacgtggacgacggcacgatgatgacggtcgaggatcacgaggtc
actggcgcatcggtcatgtctgccatgtctggtcgctcaggatcgtcgactggcgacagt
gacacactggaagaagcacttcgtatggcagcgcgcacggccggcacccagaaactgggc
ctcgacgactctgagggcgaagaagaagtcatcccatcatttggttggatcaagaagaac
tccgacaagagtgatgctcctcaagatggaaagcatgcaggccacgaaccgccatcgccc
ccggctgacgatgttgacgaagacgatggcgctatggagatggacatggaaatgacccaa
gctgtgggcggcattcttccctcaccagatgacgaacaagacgacggagagctcgacatg
tccatggatgtaactcgcgccattggtggcattttatcgcaacctagggacaaaattgcc
aatccacacgagcatggggaagaaggcgaggaaacaatgcaaatggacgagaccatggaa
gttaccaaagctctcggaggtattctgaggagtgtgccagatctcgaaccagacgagaat
gaagacatgtcaatggaaatcacaacagccatcggcggcctcattccggcacgcaacacc
aaccaagccactgccactcggcgcagaaccatgacttcggccaacagcaagaacctggat
gacgacaccatggacatggatatgaccgttggtgttggtcggatcttgccatctgtgact
ggggcccaaggccaggacgacggaaatgctacagtcggcatggatatgaccattggtgtt
gggcgtatcttgccagctgccagcaacgacgaagacaacgtggaacaagaccaaactatg
ggcatggacatgactgtcgccatgggcagtattctcaagggtcctcatgtgccagagtcc
cgcagtgatgctaagaggttcatggaagaggaggtcgacaagccagattcaccttcaaaa
gccggatcaataggtgttcccccaaaatcgccagcacaacggcttgccgcttcaaccaag
ccaacaataatgtcagctccaggaactcctgagacaaattctttcggtggtagcgctctg
cgacgcagcttgccgcgtccagggacagcaacgccgcaatcctctcctttgagaaccact
ccaagtccgcagaagtcgaccgcgcagtcgcgagcgagagcgaggtcaaaatcggcgtcg
ccgacaaaagccacgccgtctccatttaagccagtctcatcacctacgaggactccgcaa
tcgcgaacgaagcagcttggccgctctaggctaccagacagcaagccggcgaccccttcg
cctgtgaaatcggccaaaaagaacctagacgttttccagcaagaccctagcacgggagct
aggacgccgttggttgttctgacgccacagacgcgccgtctgtccggcgtgggtgccgac
agagctggcttgggatcacccaaggtggctgccattttcgatcgtcgggagtcgttgagt
gatgctactcaggcatttgtgcctggccagaaccgtggtgtttccttcgcaaatccccgc
atcatggaattcgaagtcgacaacgaccgcgaggaggaagaggagaaggagaaccaacgt
aagatacttgagcgcgaggttgacggtcaagacgacagggaggctacgctcaacctgaaa
gaaatgattcaaagcatgagcccaatgaggaagcccttgaagggccgtaagagtcttcat
gtcggcagcgcaaaaggtcttctcggcaagcgaccatttgagttatcagatgacgaagag
gctgaagcagatgatggtgtcaaaagacttaagaatcaccaggggagcccggtcaagaac
gttaggcttcaacagccccccagcaaagccgagacaactggccgacgatcgctacgatcg
tctcagaagagccttgaagattcaacacaggaacatcaaacacccaccctgacggcgctg
tcctcgagggatgatggcaatgccacgaccccgagaggacagacccggttcaaagacatc
gaagatgacacggcgacccatccgatggactttgaacgatcgcccgtcaaagatgagtcg
tctttgcagactgaccagggcgaagatcgcatccacctccaggaatttctcaacatgaca
tcgattcgattcatggaattgacgacaacgaagcggcgccatacccaggcgcccgaggcc
ttcaaggatgggctgattgacgacgagggcaactttcctctggagcgatgcgtcgtcgcc
ggtgcctgcacagttccgatgctggagctttaccagcattcctgccgtgaactcaagaaa
tacatttccgaaggacggaggattgttcgcgagattgaaacagagacttttgaagacaac
ccgccactgttccgagagtacatgtctgcgacaccagagatcaagaatgtgcttgacaac
cagttcaagaatggcaagtcgcatgcccgacttgagagcaaggcgatgtggtatgcctgg
cgtacggcgctccaggagggtctcaaggagggcctcatcagaatagcagaaggcatggat
gccgacgacaaggtccttgagcagcaacagacgctcctgtcttccattcttccaatcctc
atctctcgatttgaggcgctcaacgaagagcgaataaacctcgaagctgtggcacaggaa
ctggccgactgcgacccatccgagctcgaggctgttcgatccgagctcgcggatgtcgat
agtgacatggagaagaagactaagcagattgtgcaactccgagcacagcttgaggaatca
gaagcaactgttgagcagctcactgcccgcaagcgggcatggcaagaggagattgaggag
gccgagaagatccgcgaggaatgtcgcggctggtcgaccagtgagatctctacactcaag
gctcgcgttgatgccattgaaaagcagcacggctgggccatctccggcattgccgactcg
actgtctccatgacgtaccgacgaagcatcgaacttgtctttaacatatctgccttcggc
agcacccaaggcaagaactcgcaaatcgatctttggtacatcgcgaccaacggcgacggt
agcccgcgaacctcttcggtggaacaggaattcttcgtgcagtgcatccgcgaccatgtg
cggggtctcccgcagagccgcactaagattgtcgacttgcttcatgtgatccgtgcggca
tgggacagagccgtctccacctgcgacgacatccgccgcgtcaacatgacttttcccacg
tccgtcacgcgcacctctgattcttctatctccgtgtgctcatcgcttctgttgacggcc
attgagacgagagtcgagattgtgcttggtctgcgcggtgtgagcacctctgatggactc
gactttgtcatccagcctgacgcaagagtcgtatatggagagacattcaatacaggcaag
atgggagaattccttaccacgcacctgggtgaaaaggttgttgacaggctggccgactcc
ccttcgtggaacgatgtggtcgttgatcttcatgagcggttgattgccaggggcaggaag
tag
DBGET
integrated database retrieval system