Verticillium alfalfae: VDBG_03859
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Entry
VDBG_03859 CDS
T02227
Name
(RefSeq) DNA repair exonuclease rad1
KO
K02830
cell cycle checkpoint protein [EC:
3.1.11.2
]
Organism
val
Verticillium alfalfae
Pathway
val04111
Cell cycle - yeast
val04113
Meiosis - yeast
Brite
KEGG Orthology (KO) [BR:
val00001
]
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
VDBG_03859
04113 Meiosis - yeast
VDBG_03859
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
val03400
]
VDBG_03859
Enzymes [BR:
val01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
VDBG_03859
DNA repair and recombination proteins [BR:
val03400
]
Eukaryotic type
Check point factors
Rad9-Hus1-Rad1 complex
VDBG_03859
Rad17-Mec3-Ddc1 complex
VDBG_03859
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rad1
Motif
Other DBs
NCBI-GeneID:
9536850
NCBI-ProteinID:
XP_003005906
UniProt:
C9SEW4
LinkDB
All DBs
AA seq
326 aa
AA seq
DB search
MANNLVAPVAGQPLFRAVASSTRPLYQLLRCINFTKQIHVLVTEEGIRFSADLTRVMQGT
ASLDKKLFTTYSLNIPQSDGDSQPELPSFQIQLPALLETLQIFGAVDSATRTQKAEQDPY
RSNLRNYRPEAFSNQTLGIGGTCCLQLEEEGGPLSIIIEEAGVKTVANLTTYVPEIPEDI
PFNRDELAYKIIMQSRYLLDGLAELSPNGPKRLTITTSKNQPYLTLAGTGDLGSSVVDFA
KGRELLETFAVQERWAQTYKFDLIKSSTEAMRIASKISLRGDRQGVLSLQFMVEVEGGGV
SFLDFRFVPFISHEDGEDDSGDEQDD
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggccaataatcttgtggcgcccgtagcgggacagccgctcttcagagctgtagccagc
tcgacccgacccctgtaccaactgcttcgatgcatcaacttcaccaaacaaatacacgtt
cttgtgaccgaagagggcattcgcttctctgccgacctcacccgagtcatgcagggtacc
gcctctcttgacaagaaactctttacgacatatagcctgaacatcccccagtcggatggc
gactcgcagcccgaactccccagttttcagatccaattgcctgccctactcgagacgctg
cagatcttcggtgccgtggacagtgcgacccgaacccaaaaggcagagcaggacccatac
cgaagtaacctccgcaactaccggccagaggcgtttagcaaccagactctcggcatcggc
ggaacatgttgtctgcagctggaggaagaaggtggccctctgagtatcatcattgaagag
gcgggcgtcaaaaccgttgccaacctgacgacatatgtacccgaaatcccggaggacata
ccgtttaaccgtgacgagcttgcgtacaaaatcatcatgcagtcgcgctacctcctcgac
ggcttggcggagctgtcgcccaacggccccaagcgcctcaccatcacaacgtccaagaac
caaccatacttgacgcttgccggaaccggcgatcttggctcctcggtcgtcgactttgcc
aagggacgcgagctgctcgaaacctttgcggtacaggaacgctgggcccagacgtacaaa
tttgatctcatcaagtcgtccacagaggccatgcgcatcgccagcaagatcagcctgcgg
ggtgatcgtcagggcgtgctcagcctgcagttcatggttgaggtggagggtggtggggtc
agcttcctggactttcgcttcgtcccgtttatctctcacgaggatggcgaagacgacagt
ggagacgaacaggacgactga
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