Verticillium alfalfae: VDBG_03965 Help Entry VDBG_03965        CDS       T02227                                  Name (RefSeq) DNA mismatch repair protein msh6   KO K08737   DNA mismatch repair protein MSH6 Organism val  Verticillium alfalfae Pathway val03430   Mismatch repair Brite KEGG Orthology (KO) [BR:val00001]  09120 Genetic Information Processing   09124 Replication and repair    03430 Mismatch repair     VDBG_03965  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:val03400]     VDBG_03965 DNA repair and recombination proteins [BR:val03400]  Eukaryotic type   SSBR (single strand breaks repair)    MMR (mismatch excision repair)     Mismatch and loop recognition factors      VDBG_03965 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  MutS_V MutS_III MutS_I MutS_IV MutS_II AAA_23 AAA_27 AAA_29 AAA_21 Motif Other DBs NCBI-GeneID:  9532060 NCBI-ProteinID:  XP_003006012 UniProt:  C9SF70 LinkDB All DBs AA seq 1193 aa AA seqDB search MVEKRATPARTPARLSKTPSGSTQKSITSFFSKPATSSATKAAASTPTSTATPTQKPPKV ESPCLKESTNKSNTLSKIKRPANVTPVPSSDALEPPSSQENMDSTVTKKATITSNVLPSS PSRKTKKAVNYAESSDEYDDPFDDVPAPRNRRRVRARGAVLDDEDDFAADPDNFNPAEED EDEEMADFIASDDSDEEPTTKKRKRPAKKAAPRKRTASAVPTSPIVEPATNDDGEDIDMD DLPPHSTAQQWKFDPDAVVEPGSRAARPPAAKKSSAVSKLKVKAHTQEPSDRYPWLANIT DIDRKSPGDPEYNPSSIYIPPGAWNKFSPFEKQYWAIKQNLWDTIVFFKKGKFFELYEND ATIGHQLFDFKMTDRVNMRMVGVPESSLDMWVNQFVAKGFKVARVDQMESALGKEMRERD DQAAKSKKVDKIIRRELACILTGGTLVEGSMLQDDLATYCAAIKESITDGIPSRTMFDLT KFETFVAQTSPRELLLEKSLLSSKALRILKNNTSPTTIWNYRKPGLEFLDADVTRRELET GGYFDGDGEREGGWPTVLAEAKEKDLAMSSLGALVKYLQLLKIEQSLLSQGNFEWYNPIR RNGTLILDGQTLINLEVFANSANGSTEGTLFTLLNKCVTPFGKRLFRQWVCHPLCDIDRI NERLDAVDMLNSDRSVREQFSAQMTKMPDLERLISRIHAGVCRPDDFVKVLEGFEQIEYT MSLLGAWGGGKGLVDRLISSMPNLDEPLSYWKTAFDRMKAKNDRMFLPERGIEEDFDESQ DRIAEIKKDLGKLLEKKKAELKCKTLKFTDIGKEIFQIEAPKSTKVPSSWRQMSATSSVK RYYFDALTELVRDLQEAEETHGQIMKEVASRFFRRFDTDYTTWLQAIRIISQLDCLVSLA KASSSLGEPSCRPQFVDEERSLVEFDELRHPCMLNTVSDFIPNAIELGGNSAKINLLTGA NAAGKSTVLRMTCTAVIMAQIGCYVPATSARLTPVDRIMSRLGANDNIFASQSTFFVELS ETKKILAEATPRSLVILDELGRGTSSYDGVAVAQAVLHHVATHVGCIGFFATHYHSLATE FENHPEVRARRMQIHVDEAERRVTFLYKLEDGVAEGSFGMHCAAMCGINNRIIERAEVAA REWEHTSRLKESLEKAKTGCYIPLGMLSDVASLLRDEEEVGNVDVLLRAVEAM NT seq 3582 nt NT seq  +upstreamnt  +downstreamnt atggtcgagaagcgggcaacaccggcgcgaacgccggcgaggctgtccaagacgccttca ggcagcacccagaagtctatcacgagcttcttctccaagccggcaacttcctcagccacc aaggcagcagcatcgactccgacgtcaacggctacgccaacacagaagcccccaaaggtg gaatctccttgcctgaaagagtctaccaacaagtccaacacactctcgaagatcaagcgc cctgccaatgtaacacccgttcctagcagtgacgcccttgaaccgcctagctcccaggag aacatggattctacagtgaccaagaaggcgaccatcacttccaatgtcctacccagcagc ccttcccgtaagacgaagaaggcggtgaactatgccgagtcctcggacgagtacgacgat cctttcgacgacgtgccagctccccgaaaccgtcgccgtgttagagctcgtggcgcggtt ctggatgacgaagacgactttgccgcagacccagacaacttcaaccctgctgaagaggat gaagacgaagaaatggccgacttcatcgcctcggatgactcagacgaagaaccgactaca aagaagcgaaagcgacccgcgaagaaggcagctcctcgcaagaggactgcctcggcggtt cccacctcgcctattgtggagcctgctacgaatgatgatggcgaagatattgatatggat gacctgcccccacactcgacagctcaacagtggaaattcgaccccgatgccgtggtcgaa cccggctcgagagccgctcgtccacctgctgcgaagaagtcatcagccgtatccaaattg aaggtcaaggcccatacccaggagcccagcgatcgatacccgtggcttgcgaatatcact gatatcgaccgcaagtctccaggcgaccctgagtacaacccatccagtatttacatcccc cctggagcatggaataagttttccccctttgagaagcaatactgggcgattaaacaaaat ttgtgggacacaatcgttttcttcaagaagggtaagttcttcgaactgtacgaaaacgat gcgacgattggccatcagcttttcgacttcaaaatgacggatagggtcaatatgcgcatg gtcggcgtgcccgagagctctctcgacatgtgggtgaatcaattcgtagccaaaggcttc aaggttgcccgcgttgatcagatggagtctgctcttggcaaggagatgcgcgaacgcgat gaccaagcggcgaagagcaaaaaggttgacaagattatccggcgtgagctggcgtgcatc ctgaccggaggcacgctggttgaaggcagcatgcttcaggacgatctcgcgacttactgc gccgctatcaaggagtccatcacggatgggattccttcgaggacgatgtttgacttgacc aagttcgagacctttgtggcccaaacatccccccgtgaacttctgttagagaagtcactc ctctcgagcaaagccttgcggatcctgaagaacaacacttcgccaaccaccatctggaac tacagaaaaccaggcctcgagttcctagatgctgatgtcactcgccgggagcttgagacg ggcggatatttcgatggtgacggcgagagggaaggaggctggcccactgttcttgcagaa gcaaaggagaaggaccttgccatgtcttcgctgggtgccttggtaaagtatcttcagctt ctcaagattgagcagagtctcttgtcgcagggcaacttcgagtggtacaaccctattcga cgaaacggaaccctcattcttgacggccagacactcatcaacctggaggtatttgccaac agtgcgaacggcagcacagaagggacgctgttcaccctcctcaacaaatgtgtgacgccg tttggcaagcgccttttccggcagtgggtgtgccatcctctctgcgacattgaccggatc aacgagcgtctggacgctgtggacatgttgaactcggaccgcagcgtccgtgagcagttc tccgctcagatgacaaagatgccggaccttgagaggctgatttctagaatccacgctggg gtttgtcggcctgatgactttgtcaaggttctcgaaggctttgagcagatcgagtacaca atgagtctcttgggtgcgtggggcggtggcaagggtctcgtcgacaggcttatatcctcc atgcccaacctagacgagccgctcagctactggaagacggcttttgacaggatgaaggcg aagaatgacagaatgttcctcccggaaagaggcatcgaagaggactttgacgagagccaa gaccggattgccgaaatcaaaaaggacctgggcaagcttcttgagaagaagaaggctgag ctgaaatgcaagacgctcaagttcacagatattggaaaagaaatcttccagattgaggca cccaagtcgaccaaggttccttccagctggaggcagatgtcggccacgtccagcgtcaag cggtactatttcgatgccttgacagagctagtacgggacttgcaagaggctgaagagacc cacggacagatcatgaaggaagttgcatcgcgcttcttccgtcgtttcgataccgattac actacgtggctgcaagcgatccgcatcatctcccagctcgactgcctggtcagcctcgcg aaggcttcctcgtctttgggcgagccaagctgccgcccgcagttcgttgacgaggagaga agcctcgtcgagtttgacgaactgcgtcacccgtgcatgctgaacacagtttctgacttt attcccaacgccatcgaactgggcggcaactcggccaagatcaaccttcttacgggcgcc aacgcggccggaaagtcaacggtccttcgcatgacctgcacagccgtcatcatggcccag atcggatgctatgtccccgcgacctccgcccgcctaacacccgtggaccgcatcatgtct cgcctcggcgccaacgacaacatttttgcctcgcagtcaacattcttcgtcgagctctcc gagacgaagaagatcctcgccgaggcgacgccccgctcgctcgtcatccttgacgagctc ggacgcggcacaagctcctacgacggcgtcgccgtcgcccaggccgtccttcaccacgtc gccacgcacgtcggctgcatcggcttcttcgcgacgcactaccactccctcgccaccgag tttgagaaccaccccgaggtccgcgcccgccgcatgcagatccacgtcgacgaggccgag cgccgcgtcaccttcctgtacaagctcgaggacggcgtcgccgagggcagcttcggcatg cactgcgccgccatgtgcggcattaacaatcgtatcattgagcgcgcagaggtcgccgcc cgcgagtgggagcacacgagccgcctgaaggaaagcctcgagaaggccaagacaggctgc tacatcccgctgggcatgctcagcgacgtcgcatctctgctgcgggacgaggaggaggtg ggcaatgtcgacgtgctgcttcgggctgtggaggccatgtga

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