Verticillium alfalfae: VDBG_03973
Help
Entry
VDBG_03973 CDS
T02227
Name
(RefSeq) multidrug resistance protein
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
val
Verticillium alfalfae
Pathway
val02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
val00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VDBG_03973
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
val02000
]
VDBG_03973
04147 Exosome [BR:
val04147
]
VDBG_03973
04090 CD molecules [BR:
val04090
]
VDBG_03973
Enzymes [BR:
val01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
VDBG_03973
Transporters [BR:
val02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
VDBG_03973
Exosome [BR:
val04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
VDBG_03973
CD molecules [BR:
val04090
]
Proteins
VDBG_03973
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
AAA_29
RsgA_GTPase
AAA_22
AAA_18
AAA_16
nSTAND3
P-loop_TraG
Motif
Other DBs
NCBI-GeneID:
9532068
NCBI-ProteinID:
XP_003006020
UniProt:
C9SF78
LinkDB
All DBs
AA seq
1368 aa
AA seq
DB search
MESAAAVKVSWRDLFAFTRWTHCVALVPAVIASCAIGAFKTSLAVTLGLFFQYTVDVADG
SVGGPETIKRTAALSVILCGLGAGHWAANTAFFASWVLFGELQARSTREQLFKSLLKQDM
SWYDSQSEGVSSLLVRIESQTRELQIATSQVLGFLISDIVVSVACLIVSFYMSWKLTLVL
LATVPISIVALTLATRRLQSAIQLQKAHLSQATKYANSSITGIDLVKIYNGFDTEVWHYL
NSINASMKQYLVQAHCNAVQMGYAKFWVVSLFAVGFWYGIVLVQEGASPAQILTTFYATL
TALQGIENLMPQWLVLAKGMAAGQSLRQTGAYVNRGKKRVGTHKPSCCIGDIEVNDVSFA
YPSNPDQIVLQKSSFRFRAGETCFIVGKSGSGKSTLGNLLVNFYEPLTGTVLVDHHLLQD
LDDEWIRRNITLIQQTSVLFNETFFRNVAFGHPSPDDVTLDEVRSACDTAILQSTIAAMH
QGLDTPVGTGGYSLSGGQKQRIALARARLRDPSILILDEVTSGLDLVSKTLVMEAIRVWR
RDKTTIIITHDVSQIKDDDYVFVMEKSRLVQEGYRRDISVDEGGFFAALLSALHDEDIES
EGSADIPSPLQESFTDNESSLVSNPRESSFVGKMIMRELDQAFERPDTGHSSRPFSLGHG
TTRATELRMTRIWDTPSRSRMRFSRGLSWHVADGEASVLDENRKGAVKARARPMSSGYDE
TTSSWRHSLDLVQMAGVNIQHLRIGTPASRQSWRQTSHPLPPDKKAFDTRCGPEAARPNM
VMADTQQNVLPNPSSIALSRSVWAQLSNPDRLKLLSGIILCIVVAVSGPLFAFALTRLLE
TFWADEDVQRSVGQKWAVVMVAVAVIDGLSTWLGRYLMEFSGQAWVNALRIEALKRILQQ
PRLWFDKPKHSAGRITECMDRNAEEMRNIVGRFAPIIIVVTFMVLTAFIWALLVQWKLTL
VALSGGPAIMATVKAFSYTSTKWETTCNQGAADTSAVLAETFNNIRVVKNLTLEAYMSKK
YNKSAESTFKLGIRRAAYTSPLFGLYQAVNFFLLALVFYYAMVLVGTYEAGTAQIQQVSN
LVLFTMGQAGSLLGTIPQLAAARATAAQMLYYAALPIHSSDEEDLDTGLGKLASPLPIKM
ANLNFTYPSRPAHQVLRNLSLEIKASTCTAIALLDIDQHHLRSAMAFVPQAPFLFPASIA
ENIAYGLPDASPLRSQASLDHAARAAGIHDFVISLPGGYSTLIGEGGTDSLGEGRPQRVC
IARALARRPKLLVMDEPTSALDAETAEMVKGTIRGLIAEAGEFGMAVVIVTHAREMMQLA
ERILVLEDGSVVEEGTCEELRGRNGAFTRLVGVRRPTLRGGSRDDNQT
NT seq
4107 nt
NT seq
+upstream
nt +downstream
nt
atggagtctgccgcagctgtcaaagtatcgtggagagatctttttgctttcaccagatgg
acacactgtgtcgctctcgtcccggcagtcatcgcttcatgtgccatcggggcattcaaa
acttcgttggccgtcactctcggtctcttcttccagtataccgtcgatgttgccgacggc
tccgtcggaggcccagagactattaaacgcacggcagccctgagtgtaattctttgcggg
cttggagccggtcactgggctgccaacaccgcctttttcgcctcttgggttctcttcggc
gagctgcaggccaggagcactcgcgaacaactgttcaagagcctccttaaacaagacatg
tcctggtacgactcccagtccgagggcgtttccagtcttctcgtgcggatcgagtcacaa
actcgtgaactacaaatcgccacatcccaggttcttggctttctcataagcgatatcgtc
gtctccgtcgcctgtctcatcgtcagcttttacatgtcctggaagctcactctggtcctg
ctcgccactgttcccatctcgatagttgcgctcactctggcaactcgtcgcctccaatcc
gccatccagttacagaaggcccacctctcccaagcgaccaagtacgccaactcgtcgatc
acgggcatcgacctcgtcaagatctacaacggcttcgacacagaggtatggcactacctc
aactctatcaacgcttcgatgaagcaatacctcgtacaggcgcactgcaacgcggtgcag
atgggctacgctaagttctgggtcgtcagcctgttcgcggtgggtttctggtatgggatt
gtgctggtgcaagagggcgcgagcccggcccagatcttgacgacgttctatgccaccttg
actgccctgcagggcattgagaatctaatgccgcagtggcttgtactggctaaggggatg
gcggctggtcagtcgcttcgacagactggcgcgtatgttaacaggggaaagaagcgtgtt
ggcacccacaagccgagctgctgcattggggatattgaagtcaatgatgtgagcttcgca
tacccctcgaatcccgaccagattgtcctccagaaatcatcctttcgttttcgtgctggc
gagacgtgcttcatcgttggtaaaagcggctctggaaaaagcacattgggcaatcttctc
gtcaacttttatgaaccgctcactggaaccgtcttggtcgaccatcatcttctccaagat
cttgatgacgaatggatccgaaggaatattactctcatccagcaaacaagcgtgttgttc
aacgagacgttcttccgcaacgtggcattcggccacccatctccagacgatgtcaccctc
gacgaggtcaggtcagcctgcgacacagccatactacagtcaacgattgccgctatgcat
caggggctcgatacacccgttggcactggaggttacagccttagtggggggcaaaagcag
cgcatcgccctcgcccgtgccaggctgcgcgacccttctatcctcatcctcgatgaggtt
acaagcggacttgatcttgttagtaagactctcgttatggaggctatccgcgtctggcgc
cgggacaaaacgaccatcatcatcacgcatgatgtctcccagatcaaggacgacgactat
gtcttcgtcatggagaagagtcgtctcgtacaagaaggctaccgaagagatatctctgtc
gacgagggtggcttctttgccgcacttctttctgctttgcatgacgaggatatcgaaagc
gagggttcggcggacattccatcgccactccaagagtcattcaccgataatgaaagttcg
ttggtatcaaatcctagggaatcatccttcgtgggaaagatgatcatgcgggaactagac
caggccttcgagaggcccgataccggtcattcgtcacgacctttctctctcggacatgga
accacacgtgcaacagaacttagaatgacgcggatctgggacaccccttctcggagccga
atgaggttcagtcgaggtctgtcgtggcatgtagcagacggagaggcgtctgtacttgac
gagaaccgtaagggggcggtaaaagcacgtgcgcgaccgatgagtagcggctacgatgaa
accacgtcttcttggaggcacagcttggaccttgtgcagatggcgggagtgaacatccaa
catcttcggattggcacgcctgccagtcggcaatcatggcggcaaacttctcaccctctg
ccacctgacaaaaaggctttcgacacccgatgtggacctgaagctgctcgcccaaatatg
gtgatggccgatacgcaacagaatgtgttaccgaacccgtcctccatcgcgctctcgcgc
tcggtttgggcgcaactgtcgaatcctgaccgcctcaagctcctgtctggaatcatactc
tgcatcgtcgtcgctgtctccggacctcttttcgcgttcgccctcacccgcctcctcgag
accttctgggcggatgaggacgtacagcgctcagtcggccagaaatgggccgtcgtcatg
gtggctgttgcagtgatcgatggactttccacctggttgggcagatacctgatggagttt
tcgggtcaggcctgggtcaatgcactgcgaattgaggcattgaagcgaatcctccagcag
cccagattgtggttcgataagcccaagcactcagctggtcggattacggagtgcatggac
aggaacgccgaggagatgcggaacatcgtcggccgctttgcccccatcatcattgtcgtc
acgttcatggtgcttacggccttcatctgggcgctgcttgtgcagtggaaactgactttg
gttgcgctgtcaggtggcccggccatcatggcgactgtcaaggccttctcttacacaagt
acaaagtgggagacgacctgcaaccagggcgcagcagacacgagcgccgtgctggccgag
acattcaacaatatccgcgtcgtcaagaatttaactctcgaggcttacatgtcaaaaaag
tataacaagtcggctgagtccaccttcaagctcggcatccggcgggcggcgtacacctcg
cctctcttcggcctgtatcaagccgtcaacttttttctgctggctcttgtgttctactac
gccatggtacttgtgggcacgtacgaggcagggacagcgcagattcagcaggtgtccaac
cttgttctcttcaccatgggccaagcaggatctctactcggaacaattcctcagctggcc
gcagctcgagccacggcagcgcagatgctatactacgccgccctaccaatacattcctct
gacgaggaagacctcgacacggggcttggcaagcttgcctcgcctcttccgatcaagatg
gcgaatctgaactttacatatccatctcggcccgcgcatcaggtcctccgcaacctctcc
ctcgaaatcaaggccagcacctgcacagccatagcccttctggacattgaccaacaccac
cttcgctcagccatggccttcgttccccaggcccctttcctcttccctgcctcaatcgcc
gagaacattgcatacggtctgcccgatgcttctccgctccgcagccaggcgagtctcgat
catgcagcgcgagcggccggcattcacgatttcgtcatctcgttgcctggaggctacagc
accctcatcggcgagggggggacagactctctcggggagggcaggccccagagggtgtgt
atcgcgcgagccctggcgaggcggccgaaattgttggtgatggacgaacccacgagcgcg
ctggatgctgagactgcggagatggtgaaggggacgattcgagggctgatagccgaggcg
ggcgaatttggcatggcggttgtcattgtgacgcatgctcgggagatgatgcagctcgcc
gagagaatcttggttttggaggacggcagcgtggttgaggaagggacctgtgaggagttg
aggggacgaaacggggcatttacaaggttggttggtgttcgaaggccgacgctgaggggg
ggatcgcgtgacgataaccaaacataa
DBGET
integrated database retrieval system
