KEGG   Verticillium alfalfae: VDBG_04014
Entry
VDBG_04014        CDS       T02227                                 
Name
(RefSeq) WD repeat-containing protein
  KO
K15361  WD repeat-containing protein 48
Organism
val  Verticillium alfalfae
Pathway
val03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:val00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    VDBG_04014
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:val03400]
    VDBG_04014
DNA repair and recombination proteins [BR:val03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     VDBG_04014
SSDB
Motif
Pfam: DUF3337 WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_TEP1_2nd WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_SCAP Beta-prop_EIPR1 Beta-prop_EML_2 Beta-prop_TEP1_C EIF3I Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd WD40_RFWD3 Beta-prop_DCAF4 NBCH_WD40 Beta-prop_DCAF12 Beta-prop_Vps41 WDR90_beta-prop_4th ANAPC4_WD40
Other DBs
NCBI-GeneID: 9532676
NCBI-ProteinID: XP_003006061
UniProt: C9SFB9
LinkDB
AA seq 1004 aa
MAAKKARQRISYVLELPNSQPGGHRLGVNGLAIDKTNAILYSGGRDGVVCAWDLLDMKAG
AAGLATTDSTKPKSSTKFRAQTQAHTHWINDIVLAQNNTALVSASSDLTVKVWRPHSETQ
KDAITIGEHADYVKCVATPPHDPSANWVASGGLDRKICLWDLNGGGKTLEIDNKGEVAEK
GSIYALSVAPRIIASGGPESSVRLWDPRTGDAVTKFVGHTDNVRSILLNEAGDTVMTSSS
DSTIKLWSITAGRCMYTFTMHNDSVWSLYSDDPTLGIFYSSDRSGMVAKTDVRGTLEDMD
DGLSLAIAQEHGNISKILAADGYIWTATSTSSINKWPDVDTSSDIKLPEAYRRHRSASGS
TARPRQVSPPPAAESTDKKEENKEIPAKSILKISNTATFPKQVARDPDAAIGGNAAARKG
SEIAPDSTSHGPEPLFHLPRETIEGQFGLVKHKLLNDRRRVLTLDTAGDVLLWDLIRCEV
IQSYGKRHLEDVEPEVNTREAVAPWCSIDTSSGSLTVVLEPFNCFDAEMYADDLAPGEAV
DFRDDQRKDRRCPPSGPAHLDRDAAQYIWGGRGPRDLQRHRVLMARSGRRPPGLAIGMAT
PGARLQDVPEGAATPASPLEKRTSHANRTSVENGDYFSSTIAPADGASKGGQTPATPSEP
AASDVKSPGAENGKEKEKDANGKAPSTPFGKKKFRMGMGSMSFGSKKIERSASTSTEKPA
VVDEKAEESESSSTHEKEVDDSFLGVVQRIRNEYEKQLTDSPDKIVETGITPSLYNDTPV
LKLPSGTKVFIQEETSGSSANLYQGTVETVGQDVDVIEQRGPMWLGEVLLQNQIPPKDPV
KVSFVLVPWENSLPDLAATDGNNRLNANRMLRVKKILSYVAERIEPPVTEPDPNALRPDE
YLELYCNDMKLPNTMTLATLRAHVWKGGNDITLHYKANGRKVIENPIPTPQAAAPVEPEA
APVEPEAAPAEAGVNGADGSAAPLTPAPTTTPAATTTAPTTAAA
NT seq 3015 nt   +upstreamnt  +downstreamnt
atggcagcgaaaaaggctcgccagaggatcagctatgtcctcgagcttcccaactcccaa
cccggtggccaccgacttggcgtcaacggactcgccattgacaagaccaatgccattctt
tattccggcggacgagatggcgtcgtttgcgcctgggatctcctcgacatgaaggctggc
gcagctggcctcgcgactaccgacagcaccaagcccaaatcttccaccaagttccgcgct
caaacccaggcccatacgcactggatcaacgacattgtcctcgcccagaacaacacggca
ctcgtatctgcctcgtccgatctgaccgtcaaggtctggcgcccgcactccgagacccag
aaagatgccatcaccattggcgagcatgccgactacgtcaagtgcgtcgccaccccgccc
cacgatccgtcggccaactgggtcgcttccggcggcctcgatcgcaagatttgcctctgg
gacctgaacggcggcggcaagactcttgaaatcgacaacaagggcgaggtggccgagaag
ggctcgatctacgccctgagcgtcgcacctcgtatcatcgccagtggtggtcccgagtcc
agcgtgcgcttgtgggatcccaggaccggcgacgccgtcaccaagtttgtcggccacacg
gacaacgtgcgctccatcctgctcaacgaggccggcgacaccgtcatgacgtccagttcc
gattcgacaatcaagctctggagcatcactgctggtcgttgcatgtacacctttaccatg
cacaacgatagtgtttggtcgctctactcggacgacccgacattgggcatattctacagc
agtgaccgttctggaatggtagccaagactgatgtgcgaggcacgctcgaggacatggac
gacggcctgtcacttgccattgcgcaagagcatggcaacattagcaagattttggctgcc
gacggctacatctggacagctacatctacatcatccatcaacaagtggcccgatgtcgac
acgtcgtcagacattaagctgcccgaggcttaccgtcgacaccggtcagcctctggatcc
acagcacggcctagacaagtgtcacccccgccagctgccgagtctacagacaagaaggaa
gagaataaggaaattccagcgaaatcgatcctcaaaatctccaatacggctacattcccg
aagcaagtcgctcgagaccccgatgcggcgattggcggcaatgccgcggcgagaaaggga
tctgaaatcgcgcccgactcgacatcccatggacctgagcccctgttccaccttccacga
gaaaccatcgagggccagttcggcctggtgaagcacaagctcctaaacgacaggagaaga
gtgctgacgctagacactgctggcgatgtgctcctttgggatctgatccggtgcgaggtt
atccagagctacggaaagcgtcatttagaggacgtcgagcccgaagtcaacacccgtgaa
gctgttgccccctggtgttctatagatacgagttccggcagcctcacggttgtgcttgaa
cctttcaactgcttcgacgccgagatgtacgccgacgacctggcgccgggcgaggcggtg
gacttcagggatgaccaacgaaaggatcgccgctgcccgccgagtggccccgcccacctc
gatcgagatgccgcccaatacatttggggggggcgagggccccgggatctgcaacgacac
cgcgtgctaatggcgcgcagtgggcgccgaccccctggtcttgccatcggcatggcgacc
cctggtgcccgtctgcaagatgttccggagggcgcagctacaccggcaagccccttggag
aagaggacgtcgcacgccaaccgcacttcggtggaaaatggggactacttctccagcact
attgcaccggccgacggcgcctcgaagggtggacagacacctgcaacgccatcagagccc
gcagcaagtgacgtcaaatcgcccggcgccgagaatggtaaagaaaaggagaaggacgcg
aacggcaaggcacccagcacgccgttcggcaagaagaagttccgcatgggcatgggcagc
atgtcgtttggaagcaagaagattgaacgctcggcatcgaccagcacagagaagcctgca
gttgtggatgaaaaggcagaggagtctgagtcgtcgtcaacacacgagaaggaagtcgac
gacagtttcctcggtgtcgtccagcgtattcgcaacgaatatgaaaagcaactcaccgac
agccccgacaagattgtcgaaacgggcatcacgcccagtctgtacaacgatacgcccgtc
ctcaagctgccttctggtaccaaagtattcattcaggaggagacgtctggctcgagcgcc
aacttgtatcagggcacggtcgagacggtcggccaggatgtcgacgtcattgagcagcgt
ggtcccatgtggctgggagaggtgcttctgcagaaccagatcccgccgaaagacccagtc
aaggtgtcgtttgtgttggtgccgtgggagaactcgcttcccgacctggcggccacggat
ggcaacaaccgcctgaacgccaacagaatgctgcgcgtcaagaagatcctgtcgtatgtc
gcagagaggatcgagccgcctgtgacagagcccgacccaaatgcgctcaggccagatgag
tacctcgagttgtactgcaacgacatgaaactacccaacacaatgacgctggccacgcta
cgtgcacacgtatggaagggtggtaatgacatcacgctgcactacaaggcgaacggtcgc
aaggtgattgagaatcccatcccgacaccacaggcagcggcaccagtcgagccagaggcg
gcaccagtcgagccagaggcggcgccagccgaggcaggtgtcaatggagcggacgggtct
gccgcccctttgacgccggccccaacgaccactccggcagcgacgacaacggcgcctacg
acggcagcggcatag

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