Verticillium alfalfae: VDBG_04138
Help
Entry
VDBG_04138 CDS
T02227
Name
(RefSeq) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
val
Verticillium alfalfae
Brite
KEGG Orthology (KO) [BR:
val00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
val03016
]
VDBG_04138
Enzymes [BR:
val01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
VDBG_04138
Transfer RNA biogenesis [BR:
val03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
VDBG_04138
Prokaryotic type
VDBG_04138
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-GeneID:
9534666
NCBI-ProteinID:
XP_003006185
UniProt:
C9SFT4
LinkDB
All DBs
AA seq
496 aa
AA seq
DB search
MAKDTVLEGVFAINKPLGMSSAQVIRDCQQHFNPSTLFAPLVQQEISKRLNESGSQFKRR
GINKKGARVKMGHGGTLDPLATGVLILGVGSGTKSLQGFLDCTKTYETVVVFGAGTDSYD
RTGRILTRRPYDHITREMVEKEMDSFRGKFEQIPPLYSALKMEGKPLYEYAREDKPIPRE
IIGRDVEVKELELLEWFEPGTHQHHWPTEEAEAAEKNLAEQVWRVEKQQGNARKLTPEEE
AADEAAVNKHEDQKKKFEERQDELVRDKPPHKRRKSSSSSSAKHQALMSGALGQLPAAPQ
HHTGKGANLVPPPTTTAPWSDKGPPAARIRMTVTSGFYVRSFCHDLGTKVGSAAMMAELS
RDRQGDFALKQNCLEYDDLAKGEAVWAPQVRELLADWKEKHPDPPQKQDAFRNDRNQIKP
RVQQHSSESSKKRQQEEQPEGAKPEKRRKNSSSGDEAPVVKAAPASPKAAEAQAESPQKV
NETVQDDESEWDGIKD
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaagacaccgttctcgaaggcgtcttcgccatcaacaaacctctgggcatgagc
tctgcccaggtgatccgtgactgccagcagcacttcaacccctcgacccttttcgcaccc
ctcgtgcagcaggagatcagcaagcgcctcaatgagtcgggctcgcagttcaagcgccgc
ggtatcaacaagaagggcgcgcgcgtcaagatgggccacggaggaaccctcgatcccctc
gcgacgggcgtcctcatcctgggtgtcggctcgggaacaaagtccctgcagggttttctc
gactgcaccaagacgtacgagactgtcgtcgtattcggcgccggcacagacagctacgac
cgcactggcaggatactgacccggaggccctatgaccacattacgagggagatggtcgag
aaggagatggacagcttccgcggcaagttcgagcagattccgcccctgtactcggccctg
aagatggagggcaagcccctctacgagtacgcccgcgaggacaagcccatcccccgcgag
atcatcgggcgcgacgtcgaggtcaaggagctcgagctgctcgagtggttcgagcccggc
acccaccagcaccactggccgaccgaggaggccgaggccgccgagaagaacctcgccgag
caggtctggcgcgtggagaagcaacagggcaacgcgcgcaagttgacgcccgaggaggag
gccgccgacgaggccgccgtcaacaagcacgaggaccagaagaagaagtttgaggagaga
caggacgagctcgtaagggacaagccaccacacaagcggcgcaagtcgtcgtcgtcgtct
tctgctaagcaccaagcgctaatgtccggcgcgttgggccagctccccgcggcgccccaa
caccatacaggaaagggcgccaacctcgtcccgccgccgacgacgaccgccccctggtct
gacaagggaccccccgccgcgcgcatccgtatgaccgtcacctcgggcttctacgtccgc
agcttctgccacgacctcggcaccaaggtcggctccgccgccatgatggccgagctgagc
cgcgacaggcagggcgactttgcgctcaagcagaactgcctcgagtacgacgacctggcc
aagggcgaggccgtctgggcgccgcaggtcagggagctgctcgccgactggaaggagaag
catcccgacccccctcagaagcaggacgcgttccgcaatgaccgcaaccagatcaagccg
cgcgtgcagcagcacagcagcgagtcctcgaagaagaggcagcaagaggagcagcccgag
ggggccaaaccggagaagcgcaggaagaactccagctccggggatgaggcgccggtggtc
aaagccgcgccggcgagccccaaggcggcagaggctcaggccgaatcgccacaaaaggtg
aacgagactgtccaggacgacgagtcggagtgggatggcatcaaggactaa
DBGET
integrated database retrieval system
