KEGG   Verticillium alfalfae: VDBG_04153
Entry
VDBG_04153        CDS       T02227                                 
Name
(RefSeq) rRNA processing protein RRP9
  KO
K14793  ribosomal RNA-processing protein 9
Organism
val  Verticillium alfalfae
Brite
KEGG Orthology (KO) [BR:val00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:val03009]
    VDBG_04153
Ribosome biogenesis [BR:val03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    VDBG_04153
SSDB
Motif
Pfam: WD40 WD40_Prp19 Beta-prop_TEP1_2nd WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WDR55 EIF3I Beta-prop_DCAF12 Beta-prop_WDR75_1st Beta-prop_EML NBCH_WD40 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_CAF1B_HIR1 Beta-prop_IFT122_1st Beta-prop_WDR90_POC16_2nd Beta-prop_LRRK2 Beta-prop_WDR19_1st Beta-prop_HPS5 WD40_MABP1-WDR62_1st ANAPC4_WD40 PEP5_VPS11_N Beta-prop_SCAP Beta-prop_Vps41 WD40_like Beta-prop_IFT140_1st WDR93
Other DBs
NCBI-GeneID: 9534843
NCBI-ProteinID: XP_003006200
UniProt: C9SFU9
LinkDB
AA seq 529 aa
MSSFFTIPGANKKRKRPEASDAPKKRIAASKGPGRAAPRGGAKGAASRSKVAAPAGKKAA
AADDDDESISGSDDESIVSVSDKEEEGSGSEGEGETAAERRLRLAERYLDNVRQEVDEVG
FNAEDIDRDLIAERLIEDVAEAKGKVYRQLASEFAFDEATHTYFKNNAETFTSVAVNAPY
AYTTTKDMYLHKWRIQDLPKDQFPQTQTKKKKSKSKKPPPPPRRKPQLEQWLKGNGDPTN
KSSQRHSDRILCVAVSSDGKYLVTGGEDKRLIVYNAETLKPIRVFTHHRDAVTGLAFRRG
TNQLYSCSRDRTVKVWSLDELAYVETLFGHQDQVVDIDALAQERCVSVGARDRTARLWKV
VEESQLVFRGGGSGVDKKRPLKDVDPRSIAHEGSMERVAMIDDELFVTGSDSGALSLWSV
TKKKPMHMIPMAHGLEKRLLPTEASAEKAPGDNIVPPPQPRWITALRTIPYTDIVLSGSW
DGYVRVWKLSDDKRKLERAASSAAGRGCPSPPPIRTSTWTQSPPSKTVS
NT seq 1590 nt   +upstreamnt  +downstreamnt
atgtcgtcgttcttcaccatccccggggcgaacaagaagcggaagaggcccgaagcttcg
gatgcacccaaaaagcgaattgcagcatcaaagggcccaggtcgagccgccccgcgagga
ggtgccaaaggtgccgcctccagatccaaggtcgccgcgcctgccggcaagaaggctgcc
gctgccgacgacgacgacgagtcgatttctggaagcgatgacgagagcattgtcagcgta
tcggacaaagaggaggaaggttccgggtcagagggagagggcgagacggcagcagagcgc
cgcttgaggctggcagagaggtacctggacaatgtccggcaggaggtggacgaggtgggc
ttcaacgccgaagacattgaccgagacctgatcgcggagcgtctgatcgaggacgtcgcg
gaagccaagggaaaagtctaccgccaattggcatccgaattcgcctttgacgaggcgacg
cacacctacttcaagaacaacgcagagaccttcacatccgtcgctgtcaacgccccctac
gcctataccacgaccaaggacatgtacctgcacaagtggaggatacaggacctacccaag
gaccagttcccccagacccagaccaaaaagaagaagtcaaagtcgaagaagcccccgcca
ccgccccggaggaaaccccagctcgagcaatggctcaagggcaatggagaccccacgaac
aagtcctcccaacgacacagcgaccgcattctctgtgtggccgtctcctcagacggaaag
tatctcgtcaccggtggcgaggacaagcgtctcattgtctacaacgccgagacgctcaag
cccattcgcgtcttcacccatcaccgcgatgccgtcacgggcctggctttccgccgtggt
acgaaccagctctacagctgctcgcgcgaccgaaccgtcaaggtctggtccctggacgag
cttgcctacgtcgagactctcttcggccaccaagaccaagtcgtcgacatcgatgccctc
gcccaagagcgctgtgtcagcgtcggcgctcgtgatcgcaccgcccgtctgtggaaggtc
gtcgaggagtcgcagctcgtcttccgcggcggcggcagcggcgtcgacaagaagaggccc
ctcaaggatgttgacccacgctccatcgcacacgaaggcagcatggaacgcgttgccatg
atcgacgacgagctgttcgtcactggcagcgacagtggtgccctttccctatggagcgtc
accaagaagaagcccatgcacatgatccctatggcccacggcctggagaagcgcctgctg
cccacagaggcgtcggcagagaaggcccctggcgacaatattgtgcccccgccgcagcca
aggtggatcacggcgctcaggacaattccatacaccgacattgttctcagtggcagctgg
gacggctatgttcgcgtgtggaagctcagcgatgacaagcggaaattggagcgtgcggcg
tcctcagcggcgggaaggggctgcccgtctccgccgccgattcggacgtcgacatggaca
cagagcccgcccagcaagacggtttcctga

DBGET integrated database retrieval system