Verticillium alfalfae: VDBG_04180
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Entry
VDBG_04180 CDS
T02227
Name
(RefSeq) F-box protein pof6
KO
K15071
recyclin-1
Organism
val
Verticillium alfalfae
Brite
KEGG Orthology (KO) [BR:
val00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
val04121
]
VDBG_04180
Ubiquitin system [BR:
val04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
VDBG_04180
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec10_HB
Motif
Other DBs
NCBI-GeneID:
9534870
NCBI-ProteinID:
XP_003006227
UniProt:
C9SG57
LinkDB
All DBs
AA seq
682 aa
AA seq
DB search
MLSNLHTFAKSDWAQGWSEREQKLLTMTGIFEGAVLREFEQGYEFWDVDGRMRRYAHVLH
TLNGGAASVDLFIQKHPIFNDTEIISANSVDCLNRAGADDADLEPSQVFFELLLKKANEQ
TSIMERIFPEAETSFWELIEKIRDDIILEYSTSLFDAAHQRSLGAYLKAVSGVFEQTMLF
FQSLTPPKTSKETIETKAREMTIRVFEPHVDLYLQEELDFFTKHAELEVGTWEKRLSEQD
ASVESFYMSNINRQVDKTDFLSSFKKVVMMPVSVLPSFQAPFGGGAKPSTATPANGSGLN
TPQLSRPETPGARGSVDGRKSPLPDKAPTDELAAKAALMASRLEGIKSLFSIEVALNLVH
AAQTSLGRAAQFIRLKGQYGEEAREQCETIFVVLLRILGTKHVQVGFEKAVGHLSNYNPR
EVSHHDQSGVAPLVQFIELVNVGDLISQMIDVFYEQQLAGPKIADKNDFLDPAGLAKRKW
EQMLDENVAAGLNKGIDVLMDEVEFLHGSTQLPTDYNPQLDAASGILADPGPTATAQRIV
ELVSAHTRMLVGSTDKSMLDVFNGEVGLRLFTAVCKHLKRQRVSTAGAIKLIADMNLYFE
YIRTLRNQDLLAYFKALRELSQIYLIEPQHAKEMATIIADGDRFGGIFRAEEVYEYAQRR
ADWYQVKTKVERAMYGMECQLM
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgctgtccaacctgcacacatttgcaaagagtgactgggcgcaagggtggagcgaacgg
gaacaaaagctgctcacgatgacaggcattttcgagggggccgtactacgagagttcgaa
caaggatacgagttctgggacgtggatggcaggatgcggcgctacgcccatgtccttcac
acgctcaacggcggcgccgcgagcgttgatctctttattcagaagcaccccatcttcaac
gacacggagattatatcggcaaactcggtagactgcctgaacagagctggggccgacgac
gccgacctcgaaccgtcacaggtgttcttcgagctgttgctgaagaaggccaatgagcag
acgtccattatggaacgcatctttccagaagcggaaacgtccttctgggagctcatcgag
aagatccgagacgacatcattctggagtactctacttccttgtttgatgcggcacatcag
cgaagccttggggcttatctaaaggcggtatcaggtgttttcgaacagacaatgctgttc
ttccagtctttgacgccaccgaaaacctcaaaggagacgatcgagaccaaggccagggag
atgaccatcagagtatttgagccgcacgttgacctctatctgcaagaggagctggacttt
ttcaccaagcacgccgagttagaggtcggtacctgggaaaagaggttatcagagcaggat
gcctccgtcgagtccttttacatgtcaaacatcaatcgtcaagttgataagacggacttt
ttgagttcgttcaaaaaggtcgtcatgatgcctgtcagcgtccttcccagcttccaagca
ccctttggcggcggcgcaaagccctcgacagcgacgccggccaacggttcggggctcaac
acacctcaattatctcgtcctgagacaccaggcgccagggggagtgtggatgggcgcaag
agtcctctcccggacaaggcgccgacggacgagctggcagccaaggcggcgctaatggct
tcccgtctcgaaggcatcaagtcattgttcagcattgaagtcgctctcaacctcgtccac
gcggcgcagacgagccttggacgggcggcgcagttcatccgactcaagggccagtacggc
gaagaagcgcgcgagcagtgcgagaccatctttgtcgttctcctgcggattctcgggacg
aagcatgtccaggtcggcttcgagaaggcagttgggcatctctccaactacaacccgcgc
gaggtcagccaccacgaccagtcgggcgtggcgccgctggtgcagttcatcgagctggtc
aacgtcggcgacctcatctcgcagatgattgacgtattctacgagcagcagctcgcgggc
cccaagattgccgacaagaacgactttctcgacccggcgggcctcgccaagcgcaagtgg
gagcagatgctcgacgagaacgtggcggcgggcctcaacaaaggcatcgacgtgctcatg
gacgaggtcgaattcctgcacggctcgacgcagctgccgaccgactacaacccgcaactt
gacgccgccagcggcatcctcgcggacccgggcccgacggcgacggcgcagcgcatcgtc
gagctcgtctcggcgcacacgcgcatgctcgtcggcagcacggacaagtccatgctcgac
gtgttcaacggcgaggtcgggcttcgcctcttcacggccgtctgcaagcacctcaagcgc
cagcgcgtcagcacggccggcgccatcaagctcatcgccgacatgaacctctactttgag
tacatacgcacgctgcgcaaccaggacctgctggcctacttcaaggcgctgcgcgagctc
agccagatctacctcattgagccgcagcacgccaaggagatggccacgatcatcgccgac
ggtgaccgctttggcggcatcttccgcgccgaggaggtctacgagtacgcccagcgccgc
gccgactggtaccaggtcaagaccaaggtcgagcgggccatgtacgggatggaatgtcag
ctcatgtaa
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