Verticillium alfalfae: VDBG_04298
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Entry
VDBG_04298 CDS
T02227
Name
(RefSeq) pseudouridine synthase
KO
K15454
tRNA pseudouridine32 synthase [EC:
5.4.99.28
]
Organism
val
Verticillium alfalfae
Brite
KEGG Orthology (KO) [BR:
val00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
val03016
]
VDBG_04298
Enzymes [BR:
val01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
VDBG_04298
Transfer RNA biogenesis [BR:
val03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
VDBG_04298
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-GeneID:
9535153
NCBI-ProteinID:
XP_003006345
UniProt:
C9SGW9
LinkDB
All DBs
AA seq
549 aa
AA seq
DB search
MSRGRNTLLCVTVVCCATAPPHHAHQPVRPYKAGTTPIIKVAALGRLLAPFVRLTRSIVA
SPMTSSSPPDPVPSQLAVEQAEAAQTALPPARKTEKKQKKRTPDHGNALPDTIITPLEGP
WPRPYVIEDGLRKVEPYYHTFNTYCKERWRGRTLIDVFSCEFRDRTPEYYRKCMDDGKIA
ANGKVVGADYVIRNGDLVSHTSHRHEPPVTAEPIAVIHEDNDYLIVNKPAGVPVHPAGRY
NFNSVVEILKSERGAHFMPRPCHRLDRLTSGILCFGKTAQAATDLSRQIQARMVRKEYVA
RVIGHFPDGEVVCDQPLLQISPRLGLNRVRANGKFARTVFKRLAYYPPPLSDVDGGPEQR
PKTPEEAADEEQRPWTAKKGYSIVRCLPLTGRTHQIRVHLQFLGYPIQNDPIYANQRVWG
FDLGCNDDGTTHTDEDIMSRLEKMGKEEVADAVAYHEEMVDLYHKRRAEKLSGELCKTCD
TPLYTDPGDQELSLFLHSLRYEDSGGKWSYCSPLPPWALPPSGMSGPTAVGGLGELVEAV
KDDPIDLTS
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgagtagaggtcgaaacaccttgctctgcgtcaccgtcgtctgctgcgctaccgcacca
ccccatcacgcgcatcaaccagtccgtccttacaaggctggtaccaccccaatcatcaaa
gtggctgccctcggacgtctcttggcgcctttcgtgcggttgacccgatccatcgtcgcc
tcgcccatgacatcttcgtcgccccctgacccggtgccttcgcagctggccgtggaacag
gcagaggcagcgcagacagcgctgccgcccgctcggaagacagaaaagaagcagaagaaa
aggacacccgatcatggcaatgctctcccggacacaatcatcacccctctcgaaggaccc
tggccgcgtccctacgtcattgaggatggcctgcgcaaagtggaaccgtattatcacacc
ttcaacacctactgcaaggaacgctggcgtggtcgcaccttgatagacgtgttttcctgc
gagttccgggaccgaacacccgagtactatcggaaatgcatggacgatggcaaaattgcg
gcgaacggcaaagtcgttggcgccgattatgtcatcagaaacggtgatctagtcagtcac
acctcccatcgccacgaaccgcccgtcacggcggagcccattgccgtcattcacgaggac
aatgactatctcatcgttaacaaaccggcgggcgttccggtccaccccgccggccgctac
aacttcaactcggttgttgagatcctcaagtcggagcgtggtgcgcacttcatgccccgc
ccctgtcaccggctcgatcgtctgacgagtggtatcctgtgcttcggcaagactgcgcag
gctgctaccgacctcagccgtcaaatacaggcgcgcatggtgcgcaaagagtatgtcgcc
cgggtcatcggccactttcccgatggcgaggtggtttgcgaccagccgctgctgcagata
tcaccccgtctgggtctcaaccgtgtccgtgccaacggcaaattcgctcgtaccgtcttc
aagcgcctggcctactaccctccgccgttgtccgatgtcgacggggggccggaacaaaga
cccaagacgcccgaggaagccgcagatgaggagcagcgcccgtggactgccaagaagggt
tactccatcgtccgctgtctgcccctgaccggcaggacgcaccagatccgcgtgcatttg
cagttcctcggttatcccatccagaacgacccgatatacgccaaccaaagagtctggggg
ttcgatctcggctgtaacgatgacgggactacgcacacggatgaggatatcatgtcgcgt
ctcgagaagatgggtaaagaagaagtcgctgacgcagtagcataccacgaagaaatggtg
gatttgtaccacaaacgaagggctgagaagctctctggtgaactgtgcaagacgtgcgac
acgccgctctacacggacccaggtgatcaggagctgtctctgttccttcacagtcttcga
tacgaggactcgggaggcaaatggagttattgcagccctctgcctccctgggcgcttcca
ccgagtggcatgagtggaccgacagcagtaggggggctgggagaacttgtggaagctgtc
aaggatgacccaatcgatctgacctcgtag
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