Verticillium alfalfae: VDBG_04330
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Entry
VDBG_04330 CDS
T02227
Name
(RefSeq) transcription regulatory protein SWI3
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
val
Verticillium alfalfae
Pathway
val03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
val00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
VDBG_04330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
val03021
]
VDBG_04330
03036 Chromosome and associated proteins [BR:
val03036
]
VDBG_04330
Transcription machinery [BR:
val03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
VDBG_04330
Chromosome and associated proteins [BR:
val03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
VDBG_04330
PBAF complex
VDBG_04330
GBAF(ncBAF) complex
VDBG_04330
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
9536695
NCBI-ProteinID:
XP_003004724
UniProt:
C9SJ59
LinkDB
All DBs
AA seq
644 aa
AA seq
DB search
MDEPTNYGSPANAASPTSNTLLAQPPLVPEISSTRPDNSEDIQMGEAVTNEPIVKQDSAT
PAPITASDNPLDAPDGPAAETTISRDEDDAEIGKDAGDEPDADAAVTGTEAEGQEGKTKE
SVEAAARDHLISQTHAIILPSYSTWFDMNMVHEIERKAMAEFFNSRNRSKTPVVYKDYRD
FMINTYRLNPAEYLTVTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDGDHRPSNIGPPY
TGHFKVICDTPRGLQAFQPSADEEMTKGKQSVDTDKKASAAQAAKGDSKLEVSRNIYDGD
AKSTNLNATTEVKTNGETPTTNGVSANKEASTGPITKVNCHACAVDCTRLYYHAPTKEGS
AKAKYEICPSCFLDGHFPGDSNKSQYTRDGDGALIRQDNPTYTTVPERDAPWSDAELLRL
LEALERYDEEWTDIAEHVGTRTREECALQFLQLSIEDKYLESELTILGAHGDKQIPYNQA
DNPVMSVVGFLASLADPATTAAAAHSSADEMKRRLPTTGARAIGLATEEEREMTRLVSAA
ANVTLQKLDLKLKYFNEMEALLQAERRELERGRQQLFLDRLAFKRRVREVQQSFKTAAAT
GTDQGLRLGDDILMGNGRLTVQSVPGADTVQPLSSGGKVQSLEI
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaccgaccaactacgggtcgccggccaatgccgcgtcacccactagcaatacc
cttctcgcgcagccgccgctcgtgcctgagataagcagcaccaggccggataactctgaa
gatatccagatgggggaagccgtgaccaatgaacccattgtcaagcaagacagcgccacc
ccggccccgatcacagcttcggataatcctctggatgcaccggatggtcccgcagccgaa
accaccatctcgcgcgatgaagatgacgccgagattgggaaagatgcaggcgatgaaccc
gatgccgacgctgctgtcactggcacggaagcagaaggacaggagggcaagacaaaggaa
agtgttgaggcagctgcccgtgatcatctcatttcccagacccatgccataatattgcca
agttacagcacttggttcgatatgaacatggtccacgagattgaacgtaaggccatggcc
gagttcttcaacagccgcaaccgcagcaagacccctgtcgtttacaaagactaccgcgac
ttcatgatcaatacctatcgcctgaaccccgcggaatacttgaccgtcactgcttgcaga
cgaaacttggcaggtgatgtctgcgcaatcatgcgcgttcacgcctttctcgagcaatgg
ggcctcatcaactaccaggtggatggagatcaccgaccctctaacattggtcccccttac
acaggccacttcaaggttatttgcgacacgccccgtggcctgcaagccttccagccttcg
gccgacgaggagatgaccaagggtaagcaaagtgtagataccgacaagaaggcctcggct
gcacaagctgcgaaaggagattccaagctagaggtcagtcgaaacatctatgacggagac
gccaaatcaaccaacctcaacgccacgaccgaggtcaaaaccaacggggagacaccaacc
acaaatggtgtgtcggcaaacaaggaggcgtcgacgggccccatcacgaaggtcaactgc
cacgcctgtgccgtcgactgtactcgtctgtactaccacgctccaacgaaggagggtagc
gccaaggcaaaatatgaaatatgtcccagctgctttcttgatggtcacttccctggcgat
tcgaacaagtcacaatatacccgtgacggggacggtgcgcttatccgtcaggacaacccc
acgtatacaacggtgccagagagagatgctccatggagcgatgcggaactcttgcgacta
ctggaggctctcgagcgttatgacgaagaatggaccgacattgcagagcacgtcggcact
cgtactcgcgaggaatgtgcacttcagttcctgcaactcagtatcgaggacaagtacctt
gaatctgaactcaccattcttggggctcatggtgacaagcaaattccatacaaccaggcc
gacaacccagtcatgtctgtcgttggatttttagctagtttggctgacccagccaccaca
gccgcggctgcccactcttccgccgacgaaatgaagcgtcgtctaccaacaacgggagcg
cgcgctattggtcttgccacggaagaggagcgtgagatgacgcgactggtgtcagcggcg
gccaacgtgacgctgcagaagctggacctgaagcttaagtatttcaatgagatggaggct
ctgctccaagccgagcgtcgcgagcttgagagaggccgacagcagttattccttgaccga
ctcgcattcaagcgaagggtcagagaggtccagcagtcgttcaagacagcggcggccacg
ggtaccgaccagggacttcgactgggagatgatatattgatgggcaatggtaggcttacg
gtacaatcagttccaggagccgatactgtgcagccattgagcagtgggggcaaggtgcag
agcctggagatttga
DBGET
integrated database retrieval system
