KEGG   Verticillium alfalfae: VDBG_04447
Entry
VDBG_04447        CDS       T02227                                 
Name
(RefSeq) DNA polymerase lambda
  KO
K10981  DNA polymerase IV [EC:2.7.7.7]
Organism
val  Verticillium alfalfae
Pathway
val03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:val00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    VDBG_04447
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:val03400]
    VDBG_04447
Enzymes [BR:val01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     VDBG_04447
DNA repair and recombination proteins [BR:val03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    X-family DNA polymerases
     VDBG_04447
SSDB
Motif
Pfam: DNA_pol_B_palm DNA_pol_B_thumb DNA_pol_lambd_f NTP_transf_2
Other DBs
NCBI-GeneID: 9530055
NCBI-ProteinID: XP_003004841
UniProt: C9SJH6
LinkDB
AA seq 770 aa
MSSREPSLADKEVFFAELWALGADLNSEEDAIDEVEAERGRRSRLALQGRPSRITKPNKR
SMPPAFSVSKSPVSASHPRRTASSPLPAKEPPTAKTIERTPLAAMRRPGKEAAEDSPSVV
EETPIPDSTRAPCQPIHLLRTTSTPNPPMRQLHPPPHRDESPSLNATVKKRKRDAPVKLV
PAQQQIFREQHFFFIPNDDIAPARRIRIRKAQEYGASWTRSLDRASHVIVDKGLSWKNIE
PIVTSAGGAGTAVVVNETYPLDCIQFRSVLNPKQKQYLVTGYPSEQLVEAPGVAAPSDVS
VPAGSPASLQLKPPPNNPKRFGYVPPPSTCSQSEQSAEEAQNELAVPGAPETSAAHEAEM
EDELAELISQMQEFRDVPSDSDDDNGDGDAPIAGSSEPLSDAEHSDGEPSGKKQRPVRAT
RPHGRLLWPHQRHVATHCLPQGHPRSSSGRRAKYRRLPTPSVCPVSVRARRQDEEIVTTD
RLRRLEHAERDPADETLQRFVRIYGVGNAQASRWIAQGHRTLDDLRARAVLSANQRIGID
HYDDLNTRIPRREVEALAAVVRSAAAALDPSVELIVGGSYRRGAASSGDIDLIVTREGTT
SARELLPFLTRLTRTLEARGFLVAALATSRDDDAGGGTKWHGCCVLPEPEAARLHLGEGV
GSERGSDPGAPSPATPYRPVWRRIDFLVVPAAELGAALLYFTGNDIFNRSMRLLAARKGM
RLNQRGLYRDVLRGPDRAKVTDGALLEGRDERRIFALLNVTWREPHERWC
NT seq 2313 nt   +upstreamnt  +downstreamnt
atgtcctctcgggaaccgtcactcgcagacaaagaggtcttcttcgctgagctctgggcc
ctaggcgctgacctcaacagcgaagaagatgccatcgatgaagttgaggccgagcgaggc
cggcgctcaaggttggcgctccaaggcagaccatcgagaatcacaaagccaaataagcgc
tctatgcctcctgccttctccgtctcgaagtcgccagtctctgcctcgcaccctcgaagg
acggcctcatcccctctccctgcaaaagaaccgccgaccgccaagaccatcgagcgaacg
cctcttgccgcgatgaggaggcctgggaaagaagccgcagaggactcgccctcggtcgtc
gaagagacgcctatccccgactcgacacgtgcgccgtgccaacccatccatctcctgcgc
acgacgtccacgcccaacccgccgatgaggcagttgcacccgccgccgcaccgcgacgag
tcgccgtccctcaacgcgacggtgaagaagcgcaagcgtgacgcccctgtcaagctcgtg
cccgcgcagcagcagatcttcagagagcagcacttcttcttcatccccaacgacgacatt
gccccggcgaggcgcatccgcatccgcaaggcgcaggagtatggcgcctcgtggacgcgc
agcctcgaccgagcctcgcacgtcattgtcgacaagggcctctcgtggaagaacattgag
cccatcgtgacatctgctggtggcgccggcacggccgttgtcgtgaatgagacgtatccc
ctcgactgcatccagtttcggagcgtgttgaacccgaagcaaaaacagtacctggtcacg
ggatatccgagcgagcagctcgtcgaggcaccaggtgtggcagccccctctgatgtgtct
gtgcctgcgggatcgcctgcgtccctgcagttgaagccgccgccgaacaaccccaaacgc
ttcggttacgtgccgccgcccagtacctgctcccagagcgagcagtcggcagaggaggca
cagaacgagctggctgtgccgggggcaccagaaacatccgcggcccacgaggcagagatg
gaagacgagctcgcagaactcatctcgcagatgcaggaatttagggatgttccctctgac
tctgatgacgacaacggcgacggcgatgcccccattgcaggctcctcggagcccctttca
gatgcagaacactccgacggtgagccgagcggcaagaagcagaggccggtgcgcgccacc
cgaccacatggccgactattatggccgcatcaacgacacgtggcgacccattgcctaccg
caaggtcatcctcgctcctcaagcggcagacgcgcaaaatatcgacggctgccgacgcca
tccgtctgcccggtgtcggtgcgcgctcgccgacaagatgaggagattgtcacgaccgac
aggttgcggcgtctcgagcacgccgagcgcgacccggccgacgagacgctgcagcggttc
gtgcgcatctacggcgtcggcaacgcgcaggcaagccgctggatcgcccaggggcaccgc
actctcgacgacctccgagctagggccgtgctgtcggcgaaccagcgcatcggcatcgac
cactacgacgacctcaacacacgcatcccgcgccgcgaggtcgaggccctcgccgccgtc
gtccggtcggccgccgccgccctcgaccccagcgtcgagctcatcgtcggcggcagctac
cgccgcggcgccgcgtcgagcggcgacattgacctgatcgtcacgcgcgagggcacgacc
tcggcgcgcgagctgctcccgtttctgacgcggctgacgcgcacgctcgaggcgcgcggg
tttctcgttgcggccctggccacatcgcgcgacgacgacgccggcggcggcacaaagtgg
cacgggtgctgcgtgctgcccgagccggaagccgcgcgtctgcacttgggcgagggcgtg
ggctccgaacgaggctcagatccaggcgcgccctcacccgcgacgccgtaccgtcccgtg
tggcgccggattgactttctcgtcgtgccggcggccgagctcggggccgcgctgctgtac
tttaccggcaacgacatattcaaccgcagcatgcggctgctggcagcccgcaagggcatg
cggctcaatcagcgcgggctctaccgcgacgtcctgcgggggccggaccgggccaaggtg
accgacggggcgctgctcgaggggcgggacgagaggcgcatcttcgcgctgctgaacgtg
acgtggcgcgagccgcacgagcggtggtgctga

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