Verticillium alfalfae: VDBG_04447
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Entry
VDBG_04447 CDS
T02227
Name
(RefSeq) DNA polymerase lambda
KO
K10981
DNA polymerase IV [EC:
2.7.7.7
]
Organism
val
Verticillium alfalfae
Pathway
val03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
val00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
VDBG_04447
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
val03400
]
VDBG_04447
Enzymes [BR:
val01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VDBG_04447
DNA repair and recombination proteins [BR:
val03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
VDBG_04447
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_B_thumb
DNA_pol_lambd_f
NTP_transf_2
Motif
Other DBs
NCBI-GeneID:
9530055
NCBI-ProteinID:
XP_003004841
UniProt:
C9SJH6
LinkDB
All DBs
AA seq
770 aa
AA seq
DB search
MSSREPSLADKEVFFAELWALGADLNSEEDAIDEVEAERGRRSRLALQGRPSRITKPNKR
SMPPAFSVSKSPVSASHPRRTASSPLPAKEPPTAKTIERTPLAAMRRPGKEAAEDSPSVV
EETPIPDSTRAPCQPIHLLRTTSTPNPPMRQLHPPPHRDESPSLNATVKKRKRDAPVKLV
PAQQQIFREQHFFFIPNDDIAPARRIRIRKAQEYGASWTRSLDRASHVIVDKGLSWKNIE
PIVTSAGGAGTAVVVNETYPLDCIQFRSVLNPKQKQYLVTGYPSEQLVEAPGVAAPSDVS
VPAGSPASLQLKPPPNNPKRFGYVPPPSTCSQSEQSAEEAQNELAVPGAPETSAAHEAEM
EDELAELISQMQEFRDVPSDSDDDNGDGDAPIAGSSEPLSDAEHSDGEPSGKKQRPVRAT
RPHGRLLWPHQRHVATHCLPQGHPRSSSGRRAKYRRLPTPSVCPVSVRARRQDEEIVTTD
RLRRLEHAERDPADETLQRFVRIYGVGNAQASRWIAQGHRTLDDLRARAVLSANQRIGID
HYDDLNTRIPRREVEALAAVVRSAAAALDPSVELIVGGSYRRGAASSGDIDLIVTREGTT
SARELLPFLTRLTRTLEARGFLVAALATSRDDDAGGGTKWHGCCVLPEPEAARLHLGEGV
GSERGSDPGAPSPATPYRPVWRRIDFLVVPAAELGAALLYFTGNDIFNRSMRLLAARKGM
RLNQRGLYRDVLRGPDRAKVTDGALLEGRDERRIFALLNVTWREPHERWC
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgtcctctcgggaaccgtcactcgcagacaaagaggtcttcttcgctgagctctgggcc
ctaggcgctgacctcaacagcgaagaagatgccatcgatgaagttgaggccgagcgaggc
cggcgctcaaggttggcgctccaaggcagaccatcgagaatcacaaagccaaataagcgc
tctatgcctcctgccttctccgtctcgaagtcgccagtctctgcctcgcaccctcgaagg
acggcctcatcccctctccctgcaaaagaaccgccgaccgccaagaccatcgagcgaacg
cctcttgccgcgatgaggaggcctgggaaagaagccgcagaggactcgccctcggtcgtc
gaagagacgcctatccccgactcgacacgtgcgccgtgccaacccatccatctcctgcgc
acgacgtccacgcccaacccgccgatgaggcagttgcacccgccgccgcaccgcgacgag
tcgccgtccctcaacgcgacggtgaagaagcgcaagcgtgacgcccctgtcaagctcgtg
cccgcgcagcagcagatcttcagagagcagcacttcttcttcatccccaacgacgacatt
gccccggcgaggcgcatccgcatccgcaaggcgcaggagtatggcgcctcgtggacgcgc
agcctcgaccgagcctcgcacgtcattgtcgacaagggcctctcgtggaagaacattgag
cccatcgtgacatctgctggtggcgccggcacggccgttgtcgtgaatgagacgtatccc
ctcgactgcatccagtttcggagcgtgttgaacccgaagcaaaaacagtacctggtcacg
ggatatccgagcgagcagctcgtcgaggcaccaggtgtggcagccccctctgatgtgtct
gtgcctgcgggatcgcctgcgtccctgcagttgaagccgccgccgaacaaccccaaacgc
ttcggttacgtgccgccgcccagtacctgctcccagagcgagcagtcggcagaggaggca
cagaacgagctggctgtgccgggggcaccagaaacatccgcggcccacgaggcagagatg
gaagacgagctcgcagaactcatctcgcagatgcaggaatttagggatgttccctctgac
tctgatgacgacaacggcgacggcgatgcccccattgcaggctcctcggagcccctttca
gatgcagaacactccgacggtgagccgagcggcaagaagcagaggccggtgcgcgccacc
cgaccacatggccgactattatggccgcatcaacgacacgtggcgacccattgcctaccg
caaggtcatcctcgctcctcaagcggcagacgcgcaaaatatcgacggctgccgacgcca
tccgtctgcccggtgtcggtgcgcgctcgccgacaagatgaggagattgtcacgaccgac
aggttgcggcgtctcgagcacgccgagcgcgacccggccgacgagacgctgcagcggttc
gtgcgcatctacggcgtcggcaacgcgcaggcaagccgctggatcgcccaggggcaccgc
actctcgacgacctccgagctagggccgtgctgtcggcgaaccagcgcatcggcatcgac
cactacgacgacctcaacacacgcatcccgcgccgcgaggtcgaggccctcgccgccgtc
gtccggtcggccgccgccgccctcgaccccagcgtcgagctcatcgtcggcggcagctac
cgccgcggcgccgcgtcgagcggcgacattgacctgatcgtcacgcgcgagggcacgacc
tcggcgcgcgagctgctcccgtttctgacgcggctgacgcgcacgctcgaggcgcgcggg
tttctcgttgcggccctggccacatcgcgcgacgacgacgccggcggcggcacaaagtgg
cacgggtgctgcgtgctgcccgagccggaagccgcgcgtctgcacttgggcgagggcgtg
ggctccgaacgaggctcagatccaggcgcgccctcacccgcgacgccgtaccgtcccgtg
tggcgccggattgactttctcgtcgtgccggcggccgagctcggggccgcgctgctgtac
tttaccggcaacgacatattcaaccgcagcatgcggctgctggcagcccgcaagggcatg
cggctcaatcagcgcgggctctaccgcgacgtcctgcgggggccggaccgggccaaggtg
accgacggggcgctgctcgaggggcgggacgagaggcgcatcttcgcgctgctgaacgtg
acgtggcgcgagccgcacgagcggtggtgctga
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