Verticillium alfalfae: VDBG_04516 Help Entry VDBG_04516        CDS       T02227                                  Name (RefSeq) shuttle craft   KO K12236   transcriptional repressor NF-X1 Organism val  Verticillium alfalfae Brite KEGG Orthology (KO) [BR:val00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:val03000]     VDBG_04516    04121 Ubiquitin system [BR:val04121]     VDBG_04516 Transcription factors [BR:val03000]  Eukaryotic type   Zinc finger    Other zinc fingers     VDBG_04516 Ubiquitin system [BR:val04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    NFX1 proteins     VDBG_04516 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  R3H zf-NF-X1 Motif Other DBs NCBI-GeneID:  9530124 NCBI-ProteinID:  XP_003004910 UniProt:  C9SHI4 LinkDB All DBs AA seq 1012 aa AA seqDB search MPAEASSAPASDGAQGSRGTPEAAAERAARRRAGRGRAVAALLSRVDSRRLLLLSRGPTA LRHLQTIQAMPLHRFVAGTQRTFGGHLTSEMADGGGQVDGDAGLSAAAAEFVPGQAIAPK SRQPPRQKAPQYPLAPKSTAEDLPTRIHQDISNGQYECVICASEVLRSSKVWSCNLCWTV VHLPCVKKWHKSQIEKPNPLEQEQPDQPRTWRCPGCNSKLTEHPSSYHCWCGKDINPQNV GSLPPHSCGQTCTKPRATCPHLCFSDCHAGPCRPCDLMGPTQPCFCGKQESTKRCSDTDY DNGWSCKEICGDLLPCGEHFCEQECHSGLCGSCTVPMVSRCYCGKVEKKIPCDRRDEVRT SFNYGQIDASETDTVQPQEPFDGCFDCGASCGRKYDCGHHECQKTCHPQDEVEAHCPLSP NVVENCPCGKTPLERLLEQPRQSCQDPVPHCQEICGKTLACGHECDRTCHVGPCPPCYQR MDIACRCGRTSSRTLCHGDDMALPVCVRVCQAQLNCGRHQCGDRCCPGEKKAVERQAAKR KNKLQNPDEIEAEHICIRVCGRTLKCGAHQCQQICHRGPCGSCLEAVFDEISCTCGRTVL QPPQPCGTRPPECRFDCTRRPVCGHPPVSHNCHPDDIACPKCPFLVEKPCICGKQRLKNQ PCWFEEVRCGLPCGEKLKCGLVANQESRVGTQTKITAMRHTDKACQAKEFITCACQHRKK EIKCLATRINPEPERETLKCDDECLRLQRNQKLAAALSIDPATHTDDHVPYSDTTLKLFR DSVRWCQTQEREFRVFASDAAEKRIRFKPMPPSQRAFLHALAEDFGLDTESQDPEPHRHV SVFKTPRFVSAPSKTLAQCVKIKNVQAAAAKAGASASEAPKQAPFNALLLSTPRFALTIE ELDAALAGDFAAHNNLSFTTSFLPSDEAGLAGAVTLVHADQDQNVLRKEVTGETKDAGGW SSVVGRRPQAAAPAPVEKKPASGFVSFSRLPRKKIVQETEEDWEAAAEKMDD NT seq 3039 nt NT seq  +upstreamnt  +downstreamnt atgccggcagaggcaagctcagctcctgcgagtgacggcgcccagggaagtcgggggacg cccgaggcagcggcggagagggcagcgcggcgtcgcgcgggcaggggcagggccgtggcg gcgctgctgagcagggtggacagccggcggctgctgctcctgtcgagaggaccaacggct ctccgacacctgcaaacgattcaggcgatgccgttgcatcgcttcgttgcgggaacgcag aggacctttggcggccacctgacgtcagaaatggcggatggtggaggccaggtcgacggg gacgctgggctgagtgcggctgctgcagagtttgtgcccggccaggccatcgctccgaag agcagacaaccaccaagacagaaagcaccccaatatcctctggctccaaagtcaacggct gaggatctgcccactcgtattcaccaggacatcagcaatggacagtatgagtgtgtaatt tgcgccagcgaagtcctgcggtcctcgaaggtttggtcctgtaacctgtgctggactgtc gtccatcttccctgtgtcaagaaatggcacaagagccagatcgagaagccgaaccccctg gaacaagaacagcccgatcagcccaggacatggcgatgccctggctgcaactcaaagttg acggaacaccccagctcataccactgctggtgtggcaaagacatcaatccacagaatgtt ggcagtctcccgccacactcgtgcggccaaacctgcacgaagccgcgagcgacatgtcct catctctgcttctcagactgccacgccgggccgtgtcgtccgtgcgatttgatgggaccg acacagccctgtttctgcggcaagcaggagagcaccaagcgttgcagcgacaccgactac gacaatggctggagctgcaaggagatttgtggcgacctgctgccatgcggagagcacttt tgtgaacaagagtgccactctggtctatgtggcagctgtaccgtgccgatggtatcacgt tgctattgtggcaaggtcgagaagaagattccttgcgatcgtcgggacgaggtgcggacg tctttcaattatggccaaattgacgcctcggaaacggatactgtgcaacctcaagagccg ttcgatggttgtttcgactgcggggcttcttgtggacggaaatacgactgtggccatcac gaatgccagaaaacctgccacccccaggatgaggtcgaagctcattgtccactttctccc aatgttgtcgaaaactgcccttgcggcaaaacgccgctggaacgactgctcgaacaacca cggcagtcatgccaggatcctgttcctcactgtcaggagatatgcggcaagaccctagcg tgtgggcacgagtgtgacaggacgtgccacgttggcccttgcccaccttgttaccagagg atggacattgcctgcagatgcggccgcacatccagccggacgctctgccatggtgatgac atggctcttcccgtgtgtgtgagagtgtgtcaagcgcagttgaactgcggtcgtcaccag tgcggcgaccgctgttgtcctggcgagaagaaggcggttgagaggcaggcggcaaagcgg aagaacaagctgcagaacccggatgagattgaggccgagcatatctgcatccgcgtttgt gggaggaccctcaagtgcggtgctcatcagtgccaacagatatgtcaccgaggaccgtgc ggaagttgtctcgaggccgtcttcgatgagatcagctgcacttgcggccgcacggtgttg cagccgccccaaccatgtggaactagacctccagagtgtcgtttcgattgcacgaggcgg ccggtttgtggacatccgccagtgtcgcacaactgtcatcccgatgacatcgcgtgccca aagtgcccatttttggttgaaaagccatgcatctgtggtaagcagagactcaagaaccag ccatgctggttcgaagaggtccgctgtggacttccctgcggcgagaagcttaaatgcggc cttgtggcaaatcaagaaagtcgtgtgggcacgcagaccaagataactgccatgcgccat accgataaggcgtgccaggctaaggagttcatcacttgtgcttgccaacaccgcaagaag gaaatcaaatgtctcgccacccgtatcaacccggagcctgaacgcgaaactctcaagtgc gacgacgagtgccttcgtctccagcgcaaccagaaacttgcagccgccctcagcatcgat cctgcaactcacaccgacgaccatgttccctactcagataccacgttgaagctattccgc gacagcgtgcgttggtgtcagacccaagagcgcgagttccgcgtcttcgcctcggacgcc gccgaaaagcgcatacgcttcaagcccatgccgccttcgcagcgagccttcctccacgcc ctcgccgaggactttggcttggacacggagagccaggatccggagccgcaccgtcacgtc agcgtcttcaagacaccgcgtttcgtgtcggcgccctccaagaccctcgctcagtgcgtc aagatcaagaatgtgcaagctgcggcggccaaggccggagcgtctgcgtccgaggcgccc aagcaggcgccgttcaacgcgctgctgctctcgaccccgcggttcgcgctgaccattgag gagctggacgctgctcttgccggagattttgcggcgcataacaatctgtcttttacgacg agcttcctgccgtcagatgaggccggcttagccggtgccgtgacgctcgtgcatgcggac caggaccagaatgtcttgcggaaagaggtcacgggggagacgaaggatgctggcggctgg agctccgtcgtggggcggaggccgcaggctgcggcgcctgcgcctgtcgagaagaaacct gctagcgggttcgtgagtttctcgaggctgccgagaaagaagattgtgcaagagacggag gaagactgggaggctgctgcggaaaaaatggatgattag

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