Verticillium alfalfae: VDBG_04594
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Entry
VDBG_04594 CDS
T02227
Name
(RefSeq) IdgA domain-containing protein
KO
K16330
pseudouridylate synthase / pseudouridine kinase [EC:
4.2.1.70
2.7.1.83
]
Organism
val
Verticillium alfalfae
Pathway
val00240
Pyrimidine metabolism
val01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
val00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
VDBG_04594
Enzymes [BR:
val01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.83 pseudouridine kinase
VDBG_04594
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
VDBG_04594
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Indigoidine_A
PfkB
Motif
Other DBs
NCBI-GeneID:
9530204
NCBI-ProteinID:
XP_003004988
UniProt:
C9SHR2
LinkDB
All DBs
AA seq
768 aa
AA seq
DB search
MHVARLSATRACLSSTLSTRASCNRLSTPSYRALSLLSTSRSNVPRHGLPARSLPASRSY
STAPYAGAPGLKDFLRISDEVAEAIATNKPVVALESTIYTHGALGNDLGLEDIVRQGGGI
PAVCGILDGVPIVGLTPEEVARMVDSGNARKVSRRDIAYLAGLGLAGKKIHGGTTIAGTM
LLARLAGIRVFGTGGLGGVHRGGHDSMDVSADLTELGRTRVAVVSSGCKGFLDIPRTLEF
LETQGAFVATFADGRKGPVDFPAFWARTSGTPSPLVVENEKDAAAMILTQEAMGIESGMV
FANPIPEEAAVPAAEMAAVIETAVREANEKGFTGARNTPYVLSAIRKQTGERSTLANKAL
VRSNVARATTIAVELSKLQSGTPSLTAACDYAPTTKSTNPSPKLETSNPAAISQSIGGVG
HNVALAAHRATKSSLVRLCSLVGADAAGDTVLTALAAEGLDTSAIRQLPAPHRTAQYVAV
NDASKNLVLAMADMDILSANAVPSSQWRAAVKAASPSWLVVDANWAPRDIHAWLAAGRAS
RAKIAYEPVSTVKSTGLFPPDTELDVFPHAAVDLASPNTYELEAMWTAARENGHLATQGW
WTVVDAFGLLGARDAFVRLVGVELADAGVPVQAVQLLPYIPTVVTKLGAKGCLLTTILGR
DDPRLSDPREEKYILSRSKNGNPHIGGVYMRMFPAAERVDEIVSVNGVGDTFLGVMVAGL
AMGGRVEGLIGVAQEGAVLTLKSREAVSPELGSLEESLRDAVDLSRRA
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgcacgtcgcgcgtctctcggctacgagggcgtgcctgtcctcgaccctatcaaccaga
gcatcatgcaacagactcagcactccttcctatcgtgctctctctctcctgtccacgtcc
cggtcgaacgtgccgcgccatggtctccccgcacgctctctgccagccagccgttcctac
tccacggcgccctacgctggtgctcccgggttgaaggacttcctccgcatctcggatgaa
gttgccgaggccattgccaccaacaagcccgtcgtcgccctcgagtccaccatttacaca
cacggtgccctcgggaatgacttgggcctcgaggacattgttcgtcagggaggcggtatt
cccgctgtttgcggtatcctcgatggcgtccccatcgtcggcttgacccccgaggaggtc
gcccgcatggttgactcgggcaatgcccgcaaggtctcccgccgtgatattgcctacctc
gctggacttggtcttgctggcaagaagattcacggcggtaccaccattgccggcaccatg
ttgctggctcgcctcgccggcatccgcgtctttggtaccggtggtctcggcggcgtccac
cgtggtggccatgactcaatggacgtctctgctgatctcactgagctcggccgcacccgc
gttgccgtagtctcgtctggctgcaaaggcttcctcgacatcccccggaccctcgagttc
ctcgaaacccagggtgctttcgtcgcaacatttgccgacggccgcaagggtcctgtcgac
tttccagcattctgggcccgcacgagcggcaccccgagccctctcgtcgtcgaaaacgag
aaggatgctgctgccatgatcctgacgcaagaagcgatgggcatcgagtcgggtatggtc
tttgccaaccccatccccgaggaggccgccgtccctgccgccgagatggctgccgtcatc
gagacggccgtgcgtgaggccaacgagaagggcttcaccggcgctaggaacacgccctac
gtcctgagcgccattcgcaagcagactggcgaacgcagcacgctggccaacaaggctctc
gttcgatccaacgtcgctcgtgccaccaccatcgccgtcgagctctccaagctgcagagc
gggacacccagcctcaccgcggcctgtgactacgctcccaccaccaaatccactaacccc
tcgccgaagctcgagacatccaacccggctgccatcagtcagtccatcggcggtgtcggt
cacaacgttgccctcgctgcgcaccgtgccacaaaatcctcccttgttcgcctctgtagt
cttgttggcgccgacgctgccggcgatacagtgcttactgcccttgctgctgagggcctc
gacacctctgctattcgccagctcccggcaccgcaccgcacggcgcaatacgtcgccgtc
aacgacgcctccaagaacctcgttctcgccatggccgacatggatattctctcagcgaat
gctgttccctcctcccaatggcgcgccgccgtcaaggcggcctctccctcgtggctcgtt
gtcgacgcgaactgggcgccgcgtgatatccacgcctggctcgccgccggccgcgcttct
cgtgccaagattgcctatgagcctgtctccaccgtcaaatctacaggtctcttccctcca
gacacggagcttgacgtcttccctcatgctgccgtcgaccttgcgtccccgaacacgtac
gagctcgaggccatgtggaccgccgcgcgcgagaacggacacctcgcgacgcagggttgg
tggacggttgtcgacgctttcggcctcctcggcgcccgcgatgcctttgtgcgtctcgtc
ggtgtcgagctcgcggatgccggtgtaccggtgcaagccgtgcagctccttccgtacatc
ccgactgtcgtgacgaagctcggcgccaagggctgtctgctgacgacgatcctggggcgg
gatgacccgcgtctgagcgatccccgtgaggagaagtacattctctcgcggtcgaagaat
gggaacccgcacatcggaggcgtgtacatgcgcatgttccctgccgcggagagagtggac
gaaatcgtctctgtcaacggcgttggcgatacattcttgggcgtcatggttgcgggtctg
gcgatgggcggacgcgtggagggcttgatcggcgtggcgcaagagggtgctgtcttgacg
ctgaagagtcgcgaggcggtcagcccggagctgggcagcctggaggagagtttgagggat
gctgtcgacctgtcgaggagggcgtga
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