KEGG   Verticillium alfalfae: VDBG_04657
Entry
VDBG_04657        CDS       T02227                                 
Name
(RefSeq) splicing factor U2AF 23 kDa subunit
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
val  Verticillium alfalfae
Pathway
val03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:val00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    VDBG_04657
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:val03041]
    VDBG_04657
Spliceosome [BR:val03041]
 Complex A
  U2 snRNP components
   U2 related factors
    VDBG_04657
 Complex B
    VDBG_04657
SSDB
Motif
Pfam: zf-CCCH RRM_1 Torus zf-CCCH_3 SCRG1 zf_CCCH_4
Other DBs
NCBI-GeneID: 9530268
NCBI-ProteinID: XP_003005051
UniProt: C9SHX5
LinkDB
AA seq 210 aa
MANFLASIFGTELDKVNCSFYFKIGACRHGDRCSRKHVKPSYSQTILMPNLYQNPAYDPK
NRMNPSQLQNHFDAFYEDIWCELCQYGELEELVVCDNNNDHLIGNVYARFKYEDSAQKAC
DALNSRWYAARPIYAELSPVTDFREACCRLNSGEGCVRGGFCNFIHRKNPSDELDRELVL
STKKWLKDRGRDERSPSRSPTPEPTRRRFA
NT seq 633 nt   +upstreamnt  +downstreamnt
atggccaacttcctcgcctccattttcggcaccgagctcgacaaggtcaactgctccttt
tacttcaagatcggcgcctgccgccacggcgaccgctgctcgcgaaagcacgtcaagccc
tcgtacagccagacgattctcatgccgaatctgtaccagaacccggcctacgacccgaag
aaccgcatgaacccgagccagctgcagaaccactttgacgccttctacgaggacatttgg
tgcgagctatgccagtacggagaactcgaggagctcgtcgtctgcgacaacaataacgac
cacctcatcggcaacgtctacgcccgcttcaagtacgaagattcggcgcaaaaagcctgc
gacgcgctcaactcgcgctggtatgccgcgcggcccatctacgccgagctgtcgcccgtg
accgactttcgcgaggcctgctgtcgcctcaactcgggcgaaggctgcgtgcgcggcggc
ttctgcaactttatccaccgcaagaacccctcggacgagctcgaccgcgagctcgtcctc
agcaccaagaagtggctcaaggaccgcggccgtgacgagaggagcccctcgcgcagcccg
acgcccgagccgacgaggcggcggttcgcttga

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