KEGG   Verticillium alfalfae: VDBG_04712
Entry
VDBG_04712        CDS       T02227                                 
Name
(RefSeq) RNA-binding protein
  KO
K14407  cleavage stimulation factor subunit 2
Organism
val  Verticillium alfalfae
Pathway
val03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:val00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    VDBG_04712
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:val03019]
    VDBG_04712
Messenger RNA biogenesis [BR:val03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     VDBG_04712
    U7-dependent histone pre-mRNA processing factors
     VDBG_04712
SSDB
Motif
Pfam: CSTF2_hinge CSTF_C
Other DBs
NCBI-GeneID: 9530325
NCBI-ProteinID: XP_003005106
UniProt: C9SI30
LinkDB
AA seq 324 aa
MSKTLSRVVFVGNIPYDSAASAVRNLNDYETMGRKLRVDFSNEGGTDDNDFNQGRDGLSF
GAPNTYGQAAPAAPQASTLPPLPPGKELPANITATDAISRTLNTLPPSQLLDILTQMKAL
ASNDPARATELLQQAPQLSYAVFQALLLMGLVSPEAIHSVLEPSSGVPAPQALPAGFPPQ
GVPGYPPAGATNTPPVAATPYPAPPQPVYGAPAPAPAPALGHDTDALMRQVMELPIETIN
TLPESGARPDHGVTRTVPATEALEPWATLKDSDSARNYASPVVTAVAEQERRRSRSHANL
KPERGLYAILQLVSSIKAQPDVWK
NT seq 975 nt   +upstreamnt  +downstreamnt
atgtcgaagacgctttctcgcgttgtctttgtaggcaacatcccttacgactctgccgct
tcagcagttcgaaacctgaatgattacgagacgatgggtcgcaagttgagggttgacttc
tctaacgaaggaggtaccgacgacaatgatttcaaccaaggtcgcgatggtctcagcttc
ggtgccccgaacacctatggccaagcagcacctgccgctccacaagccagcacccttcct
ccgcttcctcctggcaaggaactgcccgccaacattaccgcgaccgacgccatctctcgc
acgctcaacacgctccctccttcgcagcttcttgatattttgacacaaatgaaagccttg
gcttccaatgatccggcccgcgcaacggagcttcttcaacaggctccccagctgtcctac
gccgtcttccaggcccttctccttatgggccttgtctcgccagaggcaattcatagtgtc
ctcgagcccagcagcggtgtgccagcgcctcaggctcttccggccggtttcccaccccag
ggcgtacctggatacccgcccgccggcgcgaccaacactccgcctgttgcggcgacaccc
tatcctgcgccaccgcaaccagtgtacggcgctcccgctcccgcccctgcgcctgcgctg
ggccatgacacagacgcactcatgaggcaggtcatggaactcccaatcgagacaatcaac
actttgcctgaaagcggagcgcgcccagatcatggcgttacgcgcacagttccagcaaca
gaggcgctagaaccatgggccacgttgaaagattcagactcggcccgcaattacgcaagc
ccagttgtcacggcagtcgccgagcaagaaagacgaaggagccgctcacatgcaaatctc
aagccggaacgaggcttgtatgccatcttgcaactggtctcaagcatcaaggcacagcca
gatgtctggaaatga

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