KEGG   Verticillium alfalfae: VDBG_04729
Entry
VDBG_04729        CDS       T02227                                 
Name
(RefSeq) 26S protease regulatory subunit S10B
  KO
K03064  26S proteasome regulatory subunit T4
Organism
val  Verticillium alfalfae
Pathway
val03050  Proteasome
Brite
KEGG Orthology (KO) [BR:val00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    VDBG_04729
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:val03051]
    VDBG_04729
Proteasome [BR:val03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    ATPase subunits
     VDBG_04729
SSDB
Motif
Pfam: AAA Prot_ATP_ID_OB_C AAA_lid_3 AAA_16 AAA_5 PRS7_OB RuvB_N AAA_2 AAA_22 DUF815 TIP49 nSTAND3 AAA_14 AAA_7 Prot_ATP_ID_OB_N Mg_chelatase AAA_11 RNA_helicase DUF4200 NPHP3_N Tektin AAA_3 TsaE Sigma54_activat AAA_18 AAA_28 AAA_33 AAA_24 bpMoxR Parvo_NS1 NACHT IstB_IS21 eIF-1a ATPase Trimer_CC ATPase_2 PhoH Zeta_toxin AAA_25 AAA_19 ABC_tran DUF5798 AAA_30 Spc29
Other DBs
NCBI-GeneID: 9530342
NCBI-ProteinID: XP_003005123
UniProt: C9SI47
LinkDB
AA seq 361 aa
MSSEEERQQALDAYRSELLKSRELETKLKDLRLEIRELQKEFDRTEDSIKALQSVGQIIG
EVLKQLPDERFIVKASSGPRYVVGCRTKLDKEKLKQGTRVALDMTTLTIMRMLPREVDPL
VYNMSLEDPGQVNFAGIGGLNDQIRELREVIELPLKNPELFLRVGIKPPKGVLLYGPPGT
GKTLLARAVASSLETNFLKIVSSAIVDKYIGESARLIREMFGYAKEHEPCIIFMDEIDAI
GGRRFSEGTSADREIQRTLMELLNQLDGFDYLGKTKIIMATNRPDTLDPALLRAGRLDRK
IEIPLPNEVGRLEILKIHAAGVITDGEIDFESVVKMSDGLNGADLRNVVTEAGLFAIKDY
P
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgtcgtccgaggaggaacgccagcaggccctcgatgcctaccgatccgagctcctcaag
tcgagggagctcgagacgaagttgaaggacttgcgcctggagattagggaactacagaag
gagtttgaccgcaccgaagactccatcaaggcgttgcaaagtgtaggccagattatcggt
gaagtcctcaaacagctaccagatgagcgattcatcgtcaaggcctcctctgggccacgg
tatgtggtcggctgccgaacgaagctcgacaaggagaagctgaagcagggaacacgcgtc
gccctcgacatgacaacactcaccatcatgcgcatgctccctcgcgaagtcgaccctctc
gtctacaacatgtcccttgaggatcccggccaggtaaactttgccggtattggtggcctg
aacgatcagattcgcgaactccgcgaggttattgagctgccactgaaaaaccccgagctg
ttcctgcgtgttggtatcaagccccccaagggcgtcctcctatacggcccccctggtacc
ggaaagacccttctggcacgtgctgttgcatctagtctcgagacaaacttcctgaagatc
gtttcctctgccatcgtcgataagtacatcggagagtcagcccgtttgattcgagaaatg
ttcggctacgcaaaggagcatgaaccctgcatcatcttcatggacgagattgacgccatt
ggtggtcgaagattctctgagggtaccagtgcggatcgtgaaatccagcggacgctcatg
gagctgctcaaccaactcgacggttttgattaccttggcaagacaaagatcatcatggcc
accaaccgacccgataccctcgaccccgctcttctccgtgccggccgtctcgatcgtaag
attgagattcctctgcctaacgaggttgggcgactggagattctcaagatccacgctgcc
ggtgtcatcaccgatggcgagattgattttgagagcgtagtcaagatgagcgatggactg
aacggtgctgatctgcgcaatgttgttacagaagctggcctcttcgctatcaaggactac
ccgtga

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