Verticillium alfalfae: VDBG_04747
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Entry
VDBG_04747 CDS
T02227
Name
(RefSeq) ATP-dependent RNA helicase eIF4A
KO
K03257
translation initiation factor 4A
Organism
val
Verticillium alfalfae
Brite
KEGG Orthology (KO) [BR:
val00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
val03019
]
VDBG_04747
03012 Translation factors [BR:
val03012
]
VDBG_04747
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
val04147
]
VDBG_04747
Messenger RNA biogenesis [BR:
val03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
VDBG_04747
mRNA cycle factors
Stress granule specific factors
VDBG_04747
Translation factors [BR:
val03012
]
Eukaryotic type
Initiation factors
eIF-4
VDBG_04747
Exosome [BR:
val04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
VDBG_04747
Exosomal proteins of bladder cancer cells
VDBG_04747
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
AAA_30
IL17R_D_N
CMS1
Flavi_DEAD
fragilysinNterm
Motif
Other DBs
NCBI-GeneID:
9530360
NCBI-ProteinID:
XP_003005141
UniProt:
C9SI65
LinkDB
All DBs
AA seq
397 aa
AA seq
DB search
MADSQGLEEINEATIESNWTEVCESFDDMELKSELLRGVYAYGFERPSAIQARAIMPVVK
GNDVIAQAQSGTGKTATFSISVLQKIDPAVKQCQALILAPTRELAQQIQKVVIAIGDFMN
IECHACIGGTSVRDDMKALQDGPQVVVGTPGRVHDMIQRRFLKTDSMKMFVLDEADEMLS
RGFTEQIYDIFQLLPQSTQVVLLSATMPQDVLEVTTKFMRDPIRILVKKDELTLEGIKQF
YIAVEKEEWKLDTLSDLYETVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMDQG
QRDLIMKEFRSGSSRVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRK
GVAINFVTAEDVRMMREIEQFYSTQIEEMPMNVADLI
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggctgactctcagggactggaggagatcaacgaggcgaccatcgagtccaactggacc
gaggtttgcgagtcgttcgacgacatggagctgaagtctgagcttctccgtggtgtctac
gcctacggtttcgagcgtccctccgccatccaggcccgtgccatcatgcccgttgtcaag
ggtaacgatgtcattgcccaggcccagtccggtactggcaagaccgccaccttctccatc
tctgtcctgcagaagatcgaccccgccgtcaagcagtgccaggcccttatccttgctccc
acccgtgagctggcccagcagatccagaaggtcgtcatcgccatcggtgacttcatgaac
attgagtgccacgcctgcatcggcggcacctctgtccgcgacgacatgaaggccctccag
gacggtcctcaggtcgtcgtcggtacccccggccgtgtccacgacatgatccagcgtcgt
ttcctcaagaccgacagcatgaagatgttcgttctcgacgaggccgacgagatgctttcg
cgcggtttcaccgagcaaatctacgacatcttccagctccttccccagagcacccaggtc
gtccttctctccgccaccatgccccaggacgtcctcgaggtcaccaccaagttcatgcgc
gaccccatccgtattctcgtcaagaaggacgagcttacccttgagggtatcaagcagttc
tacattgccgtcgagaaggaggagtggaagctcgacaccctctccgatctgtacgagact
gtcaccatcacccaggccgtcatcttctgcaacacccgtcgcaaggtcgactggctcacc
gacaagctcactgcccgtgacttcaccgtctccgccatgcacggtgacatggaccagggt
cagcgtgacctgattatgaaggagttccgttccggttcttcccgtgtcctgatcgccacc
gatcttctggctcgtggcatcgacgtccagcaggtctcgctggtcatcaactacgacctt
cccgccaaccgcgagaactacatccaccgtatcggtcgtggtggccgtttcggccgtaag
ggcgttgcgatcaactttgttaccgccgaggatgttcgcatgatgcgtgagattgagcag
ttctacagcacccagattgaggagatgcccatgaacgtcgccgacctcatctaa
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