KEGG   Verticillium alfalfae: VDBG_04775
Entry
VDBG_04775        CDS       T02227                                 
Name
(RefSeq) proliferating cell nuclear antigen
  KO
K04802  proliferating cell nuclear antigen
Organism
val  Verticillium alfalfae
Pathway
val03030  DNA replication
val03410  Base excision repair
val03420  Nucleotide excision repair
val03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:val00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    VDBG_04775
   03410 Base excision repair
    VDBG_04775
   03420 Nucleotide excision repair
    VDBG_04775
   03430 Mismatch repair
    VDBG_04775
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:val03032]
    VDBG_04775
   03400 DNA repair and recombination proteins [BR:val03400]
    VDBG_04775
DNA replication proteins [BR:val03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    VDBG_04775
DNA repair and recombination proteins [BR:val03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     VDBG_04775
   MMR (mismatch excision repair)
    Other MMR factors
     VDBG_04775
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    VDBG_04775
SSDB
Motif
Pfam: PCNA_C PCNA_N Rad9 Hus1 DUF2808 HLH
Other DBs
NCBI-GeneID: 9530388
NCBI-ProteinID: XP_003005169
UniProt: C9SI93
LinkDB
AA seq 239 aa
MLEAKLEQADILKKVVDAIKDLVQDCNFDCNDSGIALQAMDNSHVALVSMMLKAEAFSPY
RCDRNIALGVNLTSLTKSEPHIRERQDRFSEYDLKLMDIDQEHLGIPDTDYAATITLPSN
EFRRICVDLSAMSESVTIEANKDGVKFSSNGDIGNGAVTLRSHQNVDSPQTNVEIALTEP
VTLTFSLKYLVNFCKASGLSTSVKLCLSNEVPLLVEYPLTGEGGSFLQFYLAPKIGDEE
NT seq 720 nt   +upstreamnt  +downstreamnt
atgttggaagcgaagctcgagcaggcggacatcctgaagaaggtcgttgacgccatcaag
gacctggtccaagactgcaacttcgactgcaatgactctggtatcgcgctccaggccatg
gacaactctcacgttgccctggtctccatgatgctcaaggccgaggccttctctccctac
cgatgcgatcgcaacatcgcgctcggcgtcaacctgacctcgctcaccaagtctgagcct
cacattcgagaacggcaggaccgtttcagcgagtacgacctcaagctcatggacattgac
caggagcacctgggcattcccgatacggactacgccgcgaccatcaccctgccctccaac
gagttcaggcgcatctgcgtggacctttccgctatgagcgagtcggtcactattgaagcg
aacaaggatggcgtcaagttctcgagcaacggcgacatcggcaatggcgccgtcaccctg
cgctctcaccagaacgtcgacagccctcagaccaacgtcgagattgcgctcaccgagccc
gtcaccctgaccttctccctcaagtaccttgtcaacttctgcaaggcctcaggcctctcc
acttccgtcaagctctgtctctccaacgaggtgcccctgctcgtcgagtacccgctcacc
ggcgagggcggcagcttcctgcaattttacctcgcgcccaagattggcgacgaggagtaa

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