Verticillium alfalfae: VDBG_05033 Help Entry VDBG_05033        CDS       T02227                                  Name (RefSeq) hypothetical protein   KO K14772   U3 small nucleolar RNA-associated protein 20 Organism val  Verticillium alfalfae Brite KEGG Orthology (KO) [BR:val00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03009 Ribosome biogenesis [BR:val03009]     VDBG_05033 Ribosome biogenesis [BR:val03009]  Eukaryotic type   90S particles    U3 small nucleolar RNA-associated proteins     VDBG_05033 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  UTP20_N UTP20 UTP20_C TOR1L1_N Motif Other DBs NCBI-GeneID:  9532109 NCBI-ProteinID:  XP_003005427 UniProt:  C9SJ01 LinkDB All DBs AA seq 2566 aa AA seqDB search MPAVSSGRITKARKGKNLTPHQKNHRWESFSTKIGKLHSLDPLRKVRRHDLETEDLESTT SYFRTGIERWNELNIAKDFISFKRETLSLTETLASILHHEDRIFASLSHYISNQEKESLE PLLDLLTAFAHDLGTRFEKYYARSLDLIVAIAGKPQPVEVVEFTFAALAFLFKYLSRLIV PDIRPTYNVLAPLFGKTRHPPYIARFAAEATSFLIKKAAAPANRETALVDIIQHARDDLL SMSGERQFQLYQDGIMTMFAEAIKGTGQTMHSTGPVIFKALLRAVPEYELNLAQNTPWTD VICGVLTSVIHHTTPDTFPPMLEAIQAEAEYALEQKVQDQPWRFVPLIRIIATAAGVRSG ERVNNWSTLVRTLVTMLDLTAKRGPEISPADSSLVWKHVVANAAVVWHAAPMDALFSQIN DFMNAMQRDPLMRWFIPFCAYFSELDPQRFRSLFRDPFKKFINSHWSDGHNDDELCIFLP KMVKAHSLPAPGDKETLMLPQTWEGQIVEKFERLEASPFPERGTYDKDPQTWRDRCLPKY SILLDLLDSTTVRPFATAKLADLLLRKLKLALRPTSTLASDEVHFSVSQGFLAYLRMCKV AGPVDPGLKPLLRAALPRFSKSIGFLEAYLAYQQATKDQPSTERRDSSSSSEGSGTETNP VVKALIENLSSPSHDLRLATLRILGQLDSTPDELCCLEVMTDIESSPLELATLRNLAMYI RKLGQTYASLTEGSWLRQAIPSFMFGMMSLKLTPLWNDATSAMKQIGETKEGEEALLALA LDWLDVPSTRGSGPGGPPAAHRRAALTDFDCTNLQHLVSQADEIHQTAENALDLMLESFD KQQQTVDTRPANARSQALKVLAAMPALAEKRSRKLVPYFLSWAAEPEVSSDNQASSEEED NEHASGAETWSFYDRKGMLGVFDQFINPRSLYESEKVYRALLHLMENGDIEVQKSALKAI LAWKQAGVRAYQENLEYLLDEARFKNELTVLMQGEQSIKTEHRAELMPVLLRLLYGRTIS KKGAASGRHGLQATRLAVLRNLSPEDLGGFLNIAVGKLKGVSVIDESGLRDNVLDGEIMP PRKQVGFLNMMLPFINELGTDVEPYIETILNAVLYCLINACRKLHDLAAEVETESDEEDK EATHESLLKVVRTTGLKCLISLFRNAPEYAWDRYSEPIVAEIVTPRVANLPLENTQGVSG LLQLLSIWSQLPKSALFLGINKDILAKIIECVSVAKSKDEVKVFCLGIVRNLIKLSKASP TESEFNELIYVELLGPNVDFLLKHITVALKAETTGGALLDACLETVVEISPLVETSENVH EVLQISIFLLNQPARKVNPRAKGQILLILEQFVTLHEANGVDLGPTSDLFTTIFETVSAL FSYFKDKENRESLCRLLIILSKQDTALDEVAGICSAINAFVPERIEEPDYDQRLQGFNQV SGKTDAFNARQWLPLLHNLVYFIREDEEFGILTSNSADGLRTFIQEVASTEDVVPREAFY SHMSKIVLPALYSGARESSSTVRRETLRVFGFLVSQMPTWESVADLKGLLNEDDEEPSEP AFFFNILSPATSRQMEALEILVAANEAHEFSSQNLYHFFIPILEHFIFGRAEGADDHGLG AQASLTIGTLVASLDWKHYRVVLQRYIGFVESKPEQQKHSIRLLAKVADALVLASATRDG EAMQVDDAESKAAQKRLALTMPRENLAKDLTNNFLPSLIKYLHQKDDSEVSYRVPVGIII VKLMKLLPQQQMSQRLAGVLTDICHILRSKNWESRDLARDTLVEIASILGAPYFGFILKE LRGALKRGYQLHVLSYTMHSMLLKVIPEFEQGDIDYCLPSIVTVIIDDIFGVTGQEKDAE GYISQLKEVKASKSQDSMELIAKTASVSRLTDLIHPLRSLLLQKVNLKMVRKIDSLLMRV TTGLLQNPAAESRDTLVFCYEVVQDVYKSQKPEAEAKIDPRLKKYLYQKGVRKSDREANT KHTYKLVKFALDILRAVWKKYDSLRNETNISGFVPILGDAVVVGEDDVKIAAFKLLNALS KVPFSTDEATGLYKVATKEATKAISLSPTTTSELSQSALKLLSVVLRDRRDVVVKDAAVD MLLSKVKEDLTEPLYRHITFNFLRSVLDRKIETANVYDTLDHVGTVMITNDDKDTRDLAR GAFFQFLRDCELSRRSSARDKKRMRNFLTLLRSWLEQDDNPAVLSLAIQAFGFFFEAREP SEKDKKELKLVVEKVAGIVGDGDIRVAPEDLVNNALHVAQVLSQTYPEEILSADSAELWA DLRGCMAHPEPSVKLSAVKLLSSFLTDFAGEAAEAGEALKGSYGMELESDDVEDLVSLAL GTLRAPEIEEAFANEVTQILIFLGPRLQARTRDEGPTAEALAEGDEEEAEDSRLEQRGKD LQYLFWKLSSILRQDVKSTSMGMVPKVVAMEVLETVCRRVPDENLAPSLKTILFPLQAIT DPHASTPFSLDEGFKTKHDALKTRAQILMDALQKKFGTAEYTKQLLAIREEVKARRQARS SKRKIEAVAHPEKYSRDKRKKTEKKKMRNKVKGQEFKAYRQAYKSW NT seq 7701 nt NT seq  +upstreamnt  +downstreamnt atgcctgcggtatcatcgggcaggatcacaaaagcccgcaagggcaagaacctgactccc catcagaagaaccaccgatgggagtccttcagcaccaagattggcaagctgcacagtctc gatcccctccgaaaagtgcgacgacacgacctcgaaaccgaagacctcgagagcactaca tcctactttcgtaccggcatcgagcgatggaatgaactcaacattgccaaggacttcatc tctttcaagcgagagactctgtccctcacagaaacactggcctcgatcctgcatcacgag gacaggatctttgcttcgctgtcccactacatttccaaccaggagaaggagtccttggag cctcttctggacctcctgacggcgttcgcccacgatctcggaacccgcttcgagaagtac tatgcccgatcgctagacctcatcgttgccattgccggcaagccacagcctgtggaggtt gtcgaattcacattcgctgccctcgcattccttttcaaatacctctcacgcttaatcgtc cctgacatccgacctacctacaacgttcttgcacccctcttcggcaagacccgacacccg ccctacattgcccggttcgccgccgaggccaccagcttcctcatcaagaaggccgcggcg cccgcgaatcgagagacggccctggtcgacattattcaacatgctcgagacgatctgctc agcatgtcgggtgaaaggcaatttcagttgtatcaagacggcatcatgaccatgtttgcc gaggccatcaagggcaccggccagacaatgcactcgactggtcccgtcatcttcaaggcc ctcctccgtgccgtgcccgagtacgagctcaacctggcgcaaaacacaccctggaccgat gtcatctgtggcgttctcaccagtgtcattcatcacacaacccccgacacgttcccaccc atgctcgaggccatccaggccgaggcggaatacgcgctggagcaaaaggtccaggatcag ccctggaggtttgtgccactgatcaggatcatcgcaaccgccgcgggcgtgcgcagtgga gagcgagtcaacaactggtcaaccctcgtgcggactcttgtcacaatgctcgacctgact gccaagcgtggacccgagatttctcctgctgacagtagtctcgtgtggaagcacgtggtc gccaatgctgccgtggtctggcacgccgctccgatggatgccctcttctcgcagattaat gatttcatgaacgcgatgcagagggaccccttgatgcggtggttcatcccattctgcgcc tacttttcagagttggatccccagcgattccgcagcttgtttcgcgatcctttcaagaag ttcatcaacagccactggtctgatggacacaatgatgacgaactgtgcatcttcctaccg aagatggtcaaggcgcacagcttgccggcccctggcgataaggaaaccctcatgttgccc cagacatgggagggccagattgtggaaaagttcgagcgtctggaggcctcgccctttcct gaacgtggaacttatgacaaggacccgcagacgtggagagacaggtgtcttccgaaatac tcgatactgttggatcttcttgacagcaccaccgtccgccctttcgccacggctaagcta gccgatctgctcctccgaaagctcaagctcgcgctgaggcctacatcgactctggcgtcc gacgaagtccacttcagtgtcagccagggtttcctcgcgtaccttcgcatgtgcaaggtg gctggtcccgtggatcctggcctaaaacccctgcttcgagcagcgctgccaaggtttagc aaatccatcgggttcctcgaggcctatcttgcctaccagcaagctaccaaagaccagccg tcgaccgagcgccgagacagcagcagcagcagtgagggttcaggaacagaaacgaacccg gtcgtcaaagcgctcatcgagaacctgtcatcgccatctcatgacctacgactcgccacc ttgaggatcctcgggcagctcgattcgactcccgatgagctctgctgcctggaggtcatg accgacatcgaaagctccccccttgagctagcgaccctccgaaatctcgccatgtacatc cgcaaactcggccagacctatgcttcactaaccgagggctcgtggctccgccaagctatc ccatccttcatgtttggcatgatgagtctcaagctcacaccgctctggaacgatgcgaca tccgccatgaagcagattggggagaccaaggaaggcgaagaggcactccttgctcttgcc cttgactggctcgacgtgccttccacaagaggttcaggtccaggtggcccccccgcggcc catcgtcgcgctgcgctcaccgactttgactgtaccaacctgcagcatctcgtaagccaa gccgacgagattcatcagacggcggagaatgcccttgatctcatgctcgagtcctttgat aagcaacaacaaactgtcgacacgcgcccggcaaatgcccgttctcaggcgctgaaagtc cttgccgccatgcctgcccttgctgagaagcgctctcgcaagctggtgccgtatttcctg tcgtgggccgccgagcccgaagtctccagcgacaatcaagcctcttccgaagaggaggac aacgagcatgcctccggtgccgaaacgtggtctttctacgaccgcaagggcatgctcggc gttttcgatcagttcatcaacccgcggtccctctatgagagcgagaaggtgtaccgggcg ctgcttcatctgatggagaacggtgatatagaggtgcaaaagtcagctctcaaggccatt cttgcatggaagcaagcaggtgtccgcgcctaccaggagaacctcgagtatctcttggac gaggcaagattcaagaacgagctgactgttctcatgcaaggcgagcagtcgatcaagact gagcatcgagctgagttgatgcctgtcctcctgaggctgctttacggcaggacaatttct aagaagggcgccgcaagtggtcggcacggcttacaggccacacgtctcgcggtgttgaga aacttatctcctgaagacttgggtggtttcttaaacattgccgtcggcaagttgaagggg gtttctgtcattgatgagtctggtctccgtgacaatgtcctcgatggagagatcatgccg ccgcggaagcaagtcggtttcctcaacatgatgctccccttcatcaacgaactcggaacc gatgttgaaccctacatcgaaacgattcttaacgccgttctctactgcctcatcaatgcc tgccgcaagctgcatgacttggctgccgaggttgagaccgaatcggacgaggaagacaag gaggccacgcatgagtcgctcctcaaggttgttcgcactaccggcctcaagtgcctcatc tccctcttccgcaatgcgcccgaatacgcttgggatcgttactccgagcccattgttgcc gagatcgttacacccagagtcgcgaatcttccgcttgaaaacactcaaggtgtttctgga cttctgcaacttctctccatctggtctcagcttcccaagtcggctctcttcctcggaatc aacaaggacatcctggccaagatcatcgagtgcgtctcggttgcaaagagcaaagacgag gtcaaggtcttctgtctgggcattgtccgtaacctcatcaagctttccaaagcctcgccc accgagtcggagttcaacgagctcatctacgtagaactgctcggccccaacgttgacttc ctgctgaagcacattactgttgctttgaaagcagagacgaccggcggtgcccttctcgac gcatgcctcgaaactgtcgttgagatctcgcctctcgtggaaacatcggagaacgtccac gaggtcttgcaaatctcaatcttcctcctcaaccagcccgccagaaaggtcaaccctcga gccaagggtcaaattctgctcatcttggagcaattcgtgacgctgcacgaagccaacggc gtcgatctcggacccacaagcgatctcttcacaaccatctttgagactgtgtctgcgctg ttcagctacttcaaagacaaggaaaacagggaatccctatgccgactcctcatcatcttg tccaaacaggacaccgccctcgacgaggtggctggcatttgcagtgccatcaacgccttt gtgcccgagcgaatcgaggagcccgactacgaccagcgcctgcaggggttcaaccaagtg tctggcaagaccgacgcgttcaacgccaggcaatggcttcctctgcttcacaacctcgtg tacttcattcgagaagacgaagaattcggcatcttgacttccaactcggccgacggacta cgaaccttcatccaggaagtggcctcgacagaagacgttgtgccgagggaagcattctac tctcacatgtccaagattgtcctgccagcactgtactccggcgcccgcgagtcttcttca actgttaggcgagagactctgcgtgtctttggcttccttgtttcacagatgccgacatgg gagtcggttgctgacctcaagggtcttctgaacgaggacgacgaggaaccttccgagcca gctttcttcttcaacatcctgagtcccgccacatcgcgacagatggaggctctcgagatc ctagtcgctgccaacgaagcccacgagttcagcagtcaaaacctttaccacttcttcatc ccgattctggagcacttcatctttggtcgagccgaaggtgccgatgatcacggcctcgga gcccaggcttcgctcacaatcggcactctcgttgcgtctctcgactggaagcactaccgc gttgtgctgcagcgatacataggctttgtcgaatcgaagcctgagcagcagaagcacagc atccgtctcctcgccaaggttgccgatgctctagtacttgcttcggcgacaagggatgga gaagcaatgcaagttgatgacgcggagagcaaagccgctcagaagcgtcttgctctcact atgcctcgcgagaaccttgccaaggatttgaccaacaacttcttgccgtctctgatcaag taccttcaccagaaagacgactcggaagtcagttatcgtgtacctgtcggtatcattatc gtcaagctcatgaagctcctgcctcaacagcagatgagccaacggttggctggtgtcctc accgacatctgccacattctgcgaagcaagaactgggaatctcgagacttggcccgcgac acgttggtcgagattgcgagcatccttggtgccccatactttggtttcattctgaaggaa ctgcgcggcgcgctgaagcgaggctaccagctgcacgttctgtcctacaccatgcattcc atgctcctgaaggtcatccccgaattcgagcagggcgacattgactactgtcttccgtcg attgtcacggttatcattgatgatatctttggtgttacaggtcaggagaaggacgcagag ggctacatcagccagctgaaggaagtcaaggccagcaagagtcaagattcgatggagctc attgccaagactgcgtccgtgagccgcctgacggacctcatccaccctctccgatcgctc ctattgcaaaaggtcaacctcaagatggtccgcaagatcgacagtctcctgatgcgcgtc acgactggccttctccagaaccccgccgccgaaagccgcgacacgctcgtgttctgctac gaagttgtgcaggatgtctacaagagccagaagcccgaggccgaagccaagattgacccg aggctcaagaaatacctgtaccagaagggtgtcaggaagagcgaccgggaggccaacacc aagcacacgtacaaactcgtcaaatttgcgcttgacattcttcgcgccgtctggaagaag tacgatagcctgcgtaacgaaacgaacattagtggtttcgtgccgattcttggtgacgcg gtcgtcgtgggtgaggatgatgtcaagattgccgcgttcaagctgctcaatgccctgtcc aaggtgccgttcagcacggatgaggctactggtctttacaaggtcgcaacaaaggaggct acaaaagccatctcactctcgccgacgacaacctctgagctctcccagtcggcgctgaag ctgttgtccgtggtgctccgggaccgacgcgatgtcgtggtcaaggacgctgctgttgac atgcttctgagcaaggtcaaggaggacctcacggagcctttgtaccgccacatcacgttc aacttcctgcggtctgtcctcgaccgcaagattgagaccgcaaacgtctatgacactcta gaccatgtcggtacggtcatgatcaccaacgacgacaaggacacccgtgacctggcacgg ggcgccttcttccagttcctacgggactgcgagctgtcaaggagatcttccgcgcgcgac aagaagcgcatgcgcaacttcctgacgcttctccgttcctggctcgagcaggacgacaac ccagccgtcttgagtctcgctattcaggcgtttggtttcttcttcgaagccagggagccg tctgagaaggacaagaaggagctcaagctcgtcgtcgaaaaggtcgccggtatcgtgggt gacggagacatccgtgtggcgcccgaggacctggtcaacaatgcgctacacgtcgcgcag gtcctgtcccagacatacccagaggagattctctcggccgactcagccgaactatgggct gatctccgtggctgcatggcgcaccccgaaccgtcggtcaagctgagcgctgtcaaactt ctcagctcgttcctcacagactttgccggcgaggcagcagaggcaggcgaggcgctcaag ggctcgtacggcatggagctcgagagcgacgacgtcgaggatctcgtcagcttggcgctc ggcacgctgcgggcgcccgagatcgaagaggccttcgccaacgaggtgacgcagatcctc atcttcctcggtccccgtctccaagcgcggacgcgcgacgagggcccgacggccgaggcg ctggcggaaggtgatgaggaagaggccgaggactcgcggctcgagcagcgcggcaaggac ctgcagtacctcttctggaagctgtcatcgatcctgcggcaggacgtcaagtcgacgtcg atgggcatggtgcccaaggtggtggcgatggaggtgctcgagacggtgtgccgacgggtg ccggacgagaacctggcgccgtcgctcaagacgatcctgttcccgctgcaggccatcacg gacccgcacgcatcgacgccgttttcgctcgacgagggcttcaagaccaaacacgacgcc ctcaagacgcgcgcccagatcctcatggacgcgctgcagaagaaatttggcacggccgag tacaccaaacagctcctcgccatccgcgaggaggtcaaggcgcgcaggcaggcgcgctcg agcaagcgcaagatcgaggccgtggcgcacccggagaagtacagccgcgacaagaggaag aagacggagaagaagaagatgcggaacaaggtcaagggacaggagttcaaggcataccgg caggcgtacaagtcgtggtga

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