KEGG   Verticillium alfalfae: VDBG_05116
Entry
VDBG_05116        CDS       T02227                                 
Name
(RefSeq) pre-mRNA-processing factor 31
  KO
K12844  U4/U6 small nuclear ribonucleoprotein PRP31
Organism
val  Verticillium alfalfae
Pathway
val03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:val00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    VDBG_05116
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:val03041]
    VDBG_05116
Spliceosome [BR:val03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    VDBG_05116
SSDB
Motif
Pfam: Nop Prp31_C
Other DBs
NCBI-GeneID: 9535759
NCBI-ProteinID: XP_003004003
UniProt: C9SJY9
LinkDB
AA seq 582 aa
MSTLADELLQDFEDSGSENENEERQDDELGVAPSASGGLLGNGNGLNDMDVDNADGAEDD
DEEMNGIPRSASDAVEDAEDAKAKVEKMQLGAVDDVRSVASLMQTLEPVLEKIAQYQSQP
AASRVIGNIEDHPEYHLLTQSNSLSTLIDGEIILVHKYIRDHYSIRFPELETLITNPVEY
AKVVSILGNGPLDSENIKALQTSTDNPLKSTLKSVLDGPSLMIVTVEATRARVATCRMNL
FAPNLTVLIGSLTAAQLLNAAGGLTGLSKTPACNIAAWGSKKGAGAAGMATNIGIRQQGF
LYHSSIVQGIPNDLKKQAMRIVSAKLVLAARVDRIHSSPDGATGEELKSACLERLEKLTE
PPPNKGARALPAPDEKLSRKRGGRRARKAKEATAMTELRKAQNRMAFGKEEREVGYGTGE
GTVGMGMIGQGSEGKIRNLQVDQRTRAKLSAKNKGWGAASSLGGAASSFRGFGQAGASSM
DLRGKGLRTSGVGSSLGGTGTGVASSLAFTPVQGLELVDPKMQAELSRKRKAEEDRWFKG
GTFTQVGGADTSAGGGFKKPGQPPSKKAKTGAGMMAPPPRKT
NT seq 1749 nt   +upstreamnt  +downstreamnt
atgtcgacacttgcagatgagctcctgcaagatttcgaggactcgggctccgaaaacgaa
aacgaagagagacaggatgacgagcttggcgttgcgccgagcgccagtggtggcctactc
ggcaatggcaacggcctgaacgacatggacgtcgacaacgcagacggcgccgaagacgat
gacgaggaaatgaacggtatccctcggagcgcgtccgacgcggtcgaggatgccgaggac
gccaaagccaaagtcgagaagatgcaactcggcgccgtagacgacgtccgcagcgtcgcc
agtctgatgcagacccttgagccagtgttagagaaaatcgcccagtaccagtcgcaacca
gcggcgtcgcgcgtgatcggcaacatcgaagaccatcccgaatatcaccttttgacgcag
tcgaacagtctttctacgctcatcgacggcgagatcatcctcgtgcacaaatacattcgc
gatcactactccatccggttcccggaactcgaaacgctcatcacaaacccggtggaatat
gccaaggtcgtgtcgatcctcggcaacggccctctggactcggagaacatcaaggcgttg
cagacgtcgacagacaaccctctcaaaagcacgctcaagtctgtgcttgacggaccctcg
ctgatgattgtcaccgtcgaggctacccgagcaagggtcgcgacatgtcggatgaatctt
ttcgcgcccaacctgacggtcctcatcggctcgctgacggcggcgcaactgctgaacgct
gccggtggactcacgggcctttcgaagacgccggcctgcaacattgcggcgtgggggtcc
aaaaagggggccggcgccgccggcatggccaccaatatcggaatccggcagcaggggttc
ctgtaccactcctccatcgtgcaggggatccccaacgacctgaaaaagcaggcgatgcgc
atcgtctccgccaagctcgtcctcgccgcacgggtcgaccgcatccactcgagcccggac
ggcgcgaccggcgaggagctcaagtcggcgtgcctcgagcggctcgagaagttgacggag
cctccgcctaacaagggcgcccgcgcgcttccggcgcccgacgaaaagctctcgcgcaag
cgcggtggcagacgcgcgcgcaaggccaaggaggcgacggccatgacggagctccgcaag
gcgcagaaccgaatggcgtttggcaaagaggagagagaggtcggctacggcacgggcgag
ggcacggtgggcatgggcatgatcgggcagggcagcgagggcaagatcaggaacctgcag
gtcgaccagcgcacgcgggccaagctcagcgccaaaaacaagggctggggcgctgcctcg
tcgctgggcggcgcggcctcgtccttccgtgggttcggccaggcgggcgcctcgagcatg
gacctccgtggcaagggtctccgcacgtcaggcgtgggctcgtcactgggtggcaccggc
acgggtgtggcatcgtcgctggcgttcacgccggtgcagggccttgaactcgtcgatccc
aagatgcaggctgagctcagcaggaagcgcaaggcggaagaggaccgatggttcaagggg
ggcaccttcacccaggtcggcggcgcggataccagcgctggtggcggcttcaagaagccg
ggacagcctcccagcaaaaaggcgaagacaggcgctggcatgatggctccccctccacgc
aaaacttag

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