Verticillium alfalfae: VDBG_05134
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Entry
VDBG_05134 CDS
T02227
Name
(RefSeq) integral membrane protein
KO
K28812
TRP-like calcium channel
Organism
val
Verticillium alfalfae
Brite
KEGG Orthology (KO) [BR:
val00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
val02000
]
VDBG_05134
Transporters [BR:
val02000
]
Other transporters
Pores ion channels [TC:
1
]
VDBG_05134
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP
TRP_N
Motif
Other DBs
NCBI-GeneID:
9535779
NCBI-ProteinID:
XP_003004021
UniProt:
C9SK07
LinkDB
All DBs
AA seq
1062 aa
AA seq
DB search
MISSRSTSSTPSRPPRHSLREVAHVPSLDMPLISHSRPWLRVVPPLLALPGRALLLVLAC
LLLTTRPADAVQIPFSNCLPDSYRLYEPRLLQWTPLYADARFDTESENHNLRVIIWGNVT
GSHSGVSLPPPSDSHWEDPTETEGKIVRLPNEPNAKVTALKTQVEMLTYQPFGAREDFCN
DKLVNASCPLAPVFNQTDVHDFFSSYAFASFSATFLVIYGDVAATDIGCVSATITPDLGH
LAGLIKWMPFAILLFVGFATVLASMYSPWGTTDVLRWTSNFGRDQDLLRLVTPGFGDCLQ
YIQFVVLTGSLTLSYPGFYQPIVSQASWSALMFNESFVDKSPGWPAIQDGIYVTEGHHGL
ERFAHLVGMGDVEDIWVGMMVWLLVIIASVLVLIQIGFFVLWIYRLISSTTEEDLRAKNL
PFSIGNVVRVVFNFFLLPIVALSTFQLVVAGESANFAVALAVLTLGIAIGAGATLWHRLR
LSCSPSVRVVQVLPLHAFRPFPPATFMNAYHTMFSVVRFITVMPHGFPSSLELGSHRKAP
KDVRRSHPPVCLAPVARVAWPRGGLAQDLSACANCSDVQWLVATGPSRQSTLSSTRHARC
PTKCPKAGYMPAGRVRSESQGSAFLLRSQQRSSSVLDSIDTYSAPPRNFDSGSNFTPTTP
GEASTFSFLPSPGGATRPQPAMIADPSDPYYRPPRRRGDTLTGSIMSDRRRVSIADSRRY
SQLAPQPADGGDLGRCPALRTRQSLSILLRVASAPDSSSVADSYGLRPTGPMLCSCWLRR
CSAQDKEKGKGFEVVRSARMPTSMRAPGGEFSDNPPPEGIPVAMGVLRNGPIDSDDDDDD
DGRAAAAPTKDQKNTPTKAAAPQDDLLTGDEGRRSSEETVSDRSRVPDAPPALPGLDYGD
SFHLPSRIPSQASRQPSQRQRPRNLGVVGPESETPDIPRKSSKRHSQAEFDHSPTPSFNL
VPPTSPSRGQAQRAAVDTSPNRLPFTRTESQRRRLSGSSMDASDLSQIDLSGSPDDRPTS
FGYVPQHNISRIDPDQQHHVDLLGASAELVDERGASSRSSTR
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atgatatcctctcgctctacctcctcaaccccaagtcggccacctcgtcactcgcttcgc
gaagtagcccatgtaccctcgctcgacatgcctctaatctcgcacagccgcccgtggctc
cgcgttgtgccgccgctgctcgctctgcctggccgggcactgctgctcgtcctggcttgc
ctccttctaacaactcgacctgccgacgccgtccagattcctttctcgaactgtctcccc
gactcctacagattgtacgagccacgtcttctgcagtggaccccgttgtacgccgatgct
cgctttgataccgagagcgaaaaccacaatcttcgtgtcatcatttggggaaatgtgaca
ggctcccattctggggtctccctccccccgccgagcgactcccactgggaagatcccaca
gagactgagggcaagattgtccggcttcccaacgaacccaacgccaaggtcacggcgctc
aagacgcaggtcgagatgctcacataccaaccctttggcgctcgtgaagacttttgtaac
gacaagctcgtgaacgcctcctgtcccctggcgcccgtcttcaaccagactgatgtccat
gacttcttctcctcctatgcctttgcatccttctccgcgaccttcctcgttatttacggt
gacgttgccgctactgacattggttgtgtctctgcgaccatcaccccggatctcggccac
ctggccggcttgatcaaatggatgccctttgccattctgttgttcgtcggcttcgctacc
gttttggcgagcatgtacagcccctggggcaccactgacgttttgcggtggacctcaaac
tttgggcgggatcaggacttgctgcgtcttgtcacgcctggcttcggcgactgcctgcag
tatatccagtttgtcgttctcaccggatcactcactctgagttaccctggcttctaccag
cccatcgtcagccaagcgagctggtcagccttgatgtttaatgagagttttgtagacaag
tctcccggctggccagctattcaagacggcatctacgttacagaaggccatcatggtctg
gagcgctttgcgcacctggtcggtatgggtgatgtcgaggatatctgggtaggcatgatg
gtctggctgctggtcatcattgcctccgtcctcgtgctcatccagataggctttttcgtt
ctttggatctaccgactgatcagcagcacgactgaggaggacctgcgcgcgaaaaacttg
ccgttctcgataggcaacgttgtccgagtcgtcttcaacttcttcttgctgcccatcgta
gcgctctccacctttcagctcgtcgttgccggcgaatcagccaactttgccgtcgccttg
gctgtcctcacgttgggcatcgcgattggtgccggggcaaccctttggcatcgcctcaga
ttgtcttgctcgccatctgtgagggtggtgcaagtcttgcccctacacgcatttcgtccc
ttccctcctgcaacattcatgaacgcctaccataccatgttctccgtcgtgaggttcatc
accgtcatgcctcatgggttcccctcatccctggagctcgggagtcacaggaaggccccc
aaggacgtgcgtcgaagtcatcccccggtctgcctggcgccggtggcgagagtggcctgg
cccagaggtggactagcccaagatctttcggcatgcgccaactgcagcgacgtacaatgg
ctcgtcgcaacggggccgtctcgccaaagcacgctttcgagcacccgccatgctcgatgc
ccgacgaagtgtccaaaagcgggctacatgcccgcagggagagtgcgaagtgaatcccag
gggagcgcgttcctcctgaggagccaacagagaagctcttcggttcttgatagcatcgac
acgtactcggcgccgcctcgcaactttgatagcggcagcaacttcacgccgacgactcct
ggcgaggccagcaccttttcgttcctaccctcgcccggcggagccacccgccctcagccg
gctatgattgctgacccctcggacccctactatcggccgcctcggcgtcgcggcgacaca
ctgacgggctccatcatgtcggacagacgccgcgtttccattgctgactcgagacgatat
agtcagcttgcgccacagccagctgatggcggcgacctgggaagatgccctgccctgcgg
accaggcagagcctgtcgattctactacgcgtcgcgtcagcgcctgactcgagctcagtc
gcagactcgtacgggctgcgaccgactggtcccatgctctgcagctgctggctcagacga
tgctcggcgcaagacaaagagaagggcaaaggattcgaggttgtccgcagcgcacgcatg
ccaacttcgatgcgtgctcccggtggcgagtttagtgacaatcctccccctgaaggaatt
ccagtggccatgggggtactgaggaacggacccatcgattctgatgatgatgatgacgat
gatggtcgtgctgctgctgcaccgacgaaggatcagaagaacacaccgacgaaggctgct
gcgccacaagacgacttgttgacgggagacgaggggcgacgaagctcggaggagacggtg
tcggaccgatcgagggtaccagatgcgcctcctgcgctgccagggctagattacggcgac
agtttccacctgcccagccgaatcccgtcgcaagctagccgacagccatcacagagacag
aggccgaggaaccttggagtcgtcggccctgagtctgagacgcccgacatcccccggaaa
agctcgaaacgccactcgcaggccgagttcgaccactcccccacgccctcctttaacctg
gtcccgccgacatcgccgtcgcgtggccaggcacaacgggcagcagtcgatacatctccc
aatcgactgccctttacaaggacggaatcgcaacgacgacgcctctcgggctcgtcgatg
gatgctagcgatctcagccaaatcgacttgagcggatctcccgacgatcgaccgacaagt
ttcggttacgtgccacaacacaacatcagcagaatcgatccagaccagcagcaccacgtg
gacctgctgggcgcatcggcggaactcgtcgacgagaggggcgcatcgagccgcagctcc
acgagatga
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integrated database retrieval system
