Verticillium alfalfae: VDBG_05217
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Entry
VDBG_05217 CDS
T02227
Name
(RefSeq) ribonuclease Trv
KO
K01166
ribonuclease T2 [EC:
4.6.1.19
]
Organism
val
Verticillium alfalfae
Brite
KEGG Orthology (KO) [BR:
val00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
val03016
]
VDBG_05217
Enzymes [BR:
val01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.19 ribonuclease T2
VDBG_05217
Transfer RNA biogenesis [BR:
val03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
VDBG_05217
Prokaryotic type
VDBG_05217
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_T2
Motif
Other DBs
NCBI-GeneID:
9536592
NCBI-ProteinID:
XP_003004104
UniProt:
C9SK90
LinkDB
All DBs
AA seq
412 aa
AA seq
DB search
MHTRKSIFSASLAMSGALSANSLLCPSDNPQSCHNTTAFANACCFSAPGGQILQTQFWDS
NPATGPDDSWTIHGLWPDNCDGTYEQFCAPEREYTNITAILAAESPCSLKYMETFWKDQN
GNDESFWEHEFNKHGTCMNTLEPSCYPGYTPGQEVVDYVKKTIQVFKTLPSYEWLKKAGI
VPSETVTYTLDQIQTVLTAHHGHNVIINCNKNKELNELWYHFNVKGSIQTGVFVPVDPVG
SPSSCPKEGIKYLPKKKAGATTPAATTTAASTLSTVLTSAAGSTSTTANPSSISGKGHLF
ATSSGVSSPGFLVSGGNWYRGGGTPATFTATPAAGGSFTLTSSKGNCAVQENASLLCASS
VATGSSFGYDGTFLTYAGASVFYTAEVPAGNTQSTVFTKANAVTLQFTWTAA
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgcacacgcgaaagtccattttcagtgccagtctggccatgagcggcgctttgtctgcg
aactcactcctctgcccttcagataacccccagagctgccacaacacgacagctttcgcg
aacgcgtgctgtttcagtgctccgggaggccagatcctgcaaacacaattctgggacagc
aaccccgccacaggcccggatgattcgtggaccatccatggcctctggccggacaactgc
gatggcacgtacgagcagttctgcgcccccgagcgggagtacactaacatcacagccatc
ttggctgccgagtctccgtgctcactgaaatacatggagacgttctggaaggaccaaaac
ggcaacgacgaaagcttttgggagcatgagttcaacaagcacggcacgtgcatgaacacg
ctggagccgagctgctacccaggctacacgcctggccaggaggtggtcgactacgtcaag
aagaccattcaggtgttcaagacgctcccatcttacgaatggctgaagaaagctggaatc
gtcccgtcggagaccgtgacctacaccctggaccagatccagactgtcctcaccgcccac
catggccacaacgtcattatcaactgcaacaagaataaggagctcaatgagctctggtac
cacttcaacgtcaaggggtccattcaaacaggcgtgttcgtacctgtagaccccgtcggc
tcgccttcgtcttgccccaaggagggaatcaagtacctgccaaagaagaaggctggagca
acaaccccggctgccacgaccacggcggcctctaccttgagcaccgttctcacatccgcg
gccggctctacttctactaccgcaaacccatcctccatctctggaaagggccaccttttc
gcaacctcgtctggcgtgtcgagccccggcttcctcgtctccggcggcaactggtaccgc
ggcggcggcaccccggccaccttcacggccacacctgctgcggggggttcattcactctc
acctccagcaaggggaactgcgctgtgcaggagaacgcgtcgctgctgtgcgcgtcctct
gtcgccactgggtcctcgttcggctacgacggtacgttcttgacgtacgccggcgcatct
gtgttctacactgccgaggtcccggctggaaacacgcagagcaccgtcttcacgaaggcg
aatgctgtcactctgcagttcacgtggaccgcggcgtag
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