Verticillium alfalfae: VDBG_05239 Help Entry VDBG_05239        CDS       T02227                                  Name (RefSeq) hypothetical protein   KO K12881   THO complex subunit 4 Organism val  Verticillium alfalfae Pathway val03013   Nucleocytoplasmic transport val03015   mRNA surveillance pathway val03040   Spliceosome Brite KEGG Orthology (KO) [BR:val00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     VDBG_05239   09122 Translation    03013 Nucleocytoplasmic transport     VDBG_05239    03015 mRNA surveillance pathway     VDBG_05239  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:val03019]     VDBG_05239    03041 Spliceosome [BR:val03041]     VDBG_05239 Messenger RNA biogenesis [BR:val03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     EJC complex      VDBG_05239     TREX complex      VDBG_05239 Spliceosome [BR:val03041]  Complex C   Other components    EJC/TREX     VDBG_05239  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     VDBG_05239 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  RRM_1 FoP_duplication RRM_occluded RRM_PARP14_3 RBD_DEAH11 Peptidase_M35 Motif Other DBs NCBI-GeneID:  9536615 NCBI-ProteinID:  XP_003004126 UniProt:  C9SKB2 LinkDB All DBs AA seq 254 aa AA seqDB search MSGKLDQSLDEILTTRRRSNGPRRRSQRQATTTGRPTVAAPVGGVQKNPRNARTPANKPT PAKAAPHTGDSKIIVNNLPKDVNEQQIKEYFAQSVGSIKKVEISYGPNSVSRGIANVSFS KPDGASKAFNKLNGLLVDGRPIKIEIVVGASQAANVIPPTKTLAERTSQPKSQAKAQPKS AASNKHNAAKTAGAAGRGKKPRQGRTARPAKKTAEELDSEMADYFEAAPAGTTDATSGAA VPAATGDAPMDEIM NT seq 765 nt NT seq  +upstreamnt  +downstreamnt atgtccggcaagcttgaccagtctcttgacgagatcctcaccacgcgccgccgctccaac ggccctcgccgccgctctcagcgccaggccaccaccaccggccgtcccacggttgccgca cctgtcggcggtgttcagaagaaccccaggaacgcgcgcaccccggccaacaagcccact ccggccaaggccgcccctcacactggtgacagcaagatcatcgtgaacaaccttcccaag gacgtgaacgagcagcaaatcaaggagtactttgcgcaatcggtcggttccattaagaag gttgaaatctcttacggaccgaactcggtcagccgtggcatcgccaacgtctccttcagc aagcccgatggcgctagcaaggccttcaacaagctcaacggtctgttggtcgatggccgc cccatcaagattgagattgtcgtaggcgcctcccaggcggccaacgtgatcccgcccacc aagacgctcgccgagcgcacttcccagcctaagtcgcaggccaaggctcagcccaagtcc gccgcttccaacaagcacaacgccgcgaagaccgccggtgctgccggcaggggcaagaag ccccgtcagggccgcactgctaggcccgcgaagaagaccgccgaggagcttgactcagag atggccgactacttcgaggctgctcctgctggcactactgatgctacctctggcgctgcc gtccccgctgccactggcgacgcccccatggatgagatcatgtag

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