Verticillium alfalfae: VDBG_05267
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Entry
VDBG_05267 CDS
T02227
Name
(RefSeq) elongator complex protein
KO
K11373
elongator complex protein 1
Organism
val
Verticillium alfalfae
Brite
KEGG Orthology (KO) [BR:
val00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
val03016
]
VDBG_05267
Transfer RNA biogenesis [BR:
val03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
VDBG_05267
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
Beta-prop_ELP1_2nd
A-sol_ELP1
TPR_ELP1
Beta-prop_WDR19_1st
TPR_GEMI5
THD_CWZF3-5-7
Motif
Other DBs
NCBI-GeneID:
9531133
NCBI-ProteinID:
XP_003004154
UniProt:
C9SKE0
LinkDB
All DBs
AA seq
1102 aa
AA seq
DB search
MRNLRNIRFGQWSHADITSTCWDPANDDLLCTVGPTEARATIDLVRISDQNKLSSKTVAT
WDAPSPNPDVTADSIISVHHFSDTATTCIILAGGDIITVQESETFSSGQDAAHIEMVGSI
DAGITAARWSPDDELLTITTGDGNAVFMGRTFDPIAEVAMTARDFAASKHVSVGWGKKET
QFEGRGAKALRDPTIPEKVDEGVLSTQDDRQVTITWRGDGTYVAVNAIEGSRRVVRVYTR
EGVLDSASEPVDGLEGSLSWRPAGNLLAAVQRFKEKIDVVFFERNGLRHGQFTLRSPDGP
VTEHGRIRLEWNADSTVLAVILGDKVQLWTMGNYHWYLKQEIPHASSAPPWLAWHPEKAL
RLALATTDALTASEYTFTVARGALMPPYDFGAVAVADGQTVKVTPIRTANVPPPMSLFDL
EVPSNIVEVVFNVDNSRMAVLHRQGLELFQWETKGERALRPKLLGSATFESLLGDPRARV
PLQTCFSASDELCVLVFDQELKIEVFNFTPSTSTFSLANIHELSDLDPVSSISSHCGLSD
AEAYAQDRSGKLFSLSGGAGLTSLGRQLPAPLAWQQLVNIEDQSVSIGMTRNGHLFADTH
LLAKNCTSFVVTDAHIIFTTNNHFVKFVHLVSPDEMEVPGDNPQDDERCRSIERGARLIT
AMPTNMSIVLQMPRGNLETIYPRAMVVAGIRKLVDEKNYARAFSYCRTQRVDMNILYDHQ
PEQFLAHVGLFLDQLKDVTYIDLFLSSLREEDVTQSMYKDTKRTADRPSEISPDVLAGEN
DSKSKVNKICNSILKSLQSKKDTNLQNIITAHVCKVPPALDDGLTLTTLWVFTTRELALL
VLSKSQRDPREYLPFIQDLHQLPTLRRHFQIDDHLERRGKALVHLKSLDVFDELQQYVVK
YALYQEALDLYRYDKPKHRTLTNLFAEHSESGSKYRDAGLAYEFLENYSKATACYRASGA
SSWRECLYAAQQQTPALSPDALSDLASSLADALTEAKDHTSAATIYIEYLSSIETAIRSL
CKGSQFAEALRLISQKARLDLLSTVFDPALVDALSSTTDLLADCKAQLRAQVPRIMELRR
RAEEDPLAFYEGERGPAGADIP
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaatcttcgcaacatccgcttcggccagtggtcccacgccgacattacttcgacc
tgctgggaccccgccaacgatgacctcttgtgcacagtcggacctactgaggcgcgggcc
accatcgacctggtaaggatatcagaccagaacaaactatcatccaaaactgttgctacc
tgggacgcgcccagccctaaccctgatgtcaccgccgactcgatcatcagcgttcaccac
tttagcgacacggccacgacctgcatcattctcgcgggcggcgacatcatcactgttcag
gagtccgaaacattttcctcgggccaagatgccgcacatattgagatggttggctccatc
gacgccggcatcaccgcagcgcgctggtcgcccgatgatgagctactcaccatcaccacg
ggcgacggaaacgccgtcttcatggggcggaccttcgacccaatcgccgaggtggccatg
acggctcgggactttgccgcatcgaagcatgtctctgtcggctggggaaagaaggagacg
cagtttgagggacgcggcgccaaggccctcagggacccgacaattccagaaaaggtagac
gagggtgtgctcagcacacaggacgaccgtcaagtcaccattacatggaggggtgacggt
acgtacgttgccgtcaacgccattgaaggatcgaggagggtggtcagggtgtacacccgt
gagggcgtgctcgacagtgccagcgagcctgtcgatgggctcgagggcagcttgagttgg
cggccggcaggaaacctgcttgcagctgtgcagcgttttaaggagaagattgatgtcgtc
ttctttgagaggaatggtctgagacacggccagttcaccctgaggtctccggacggaccg
gtcacagagcacggcaggatcaggcttgagtggaacgccgactcgacggtcttggctgtc
atcctgggcgacaaggttcagctgtggacgatggggaactaccattggtatctcaagcag
gagattcctcatgcttcttctgctcctccttggctggcatggcatccagagaaggcgttg
aggcttgcattggcaacaactgatgccctcacagcttcggaatacacattcacagtagcc
cgaggagcactgatgccgccttacgatttcggcgccgtggcggttgccgatgggcagact
gtcaaggtcaccccgatccggacagcaaatgtccctccgcccatgtcgttgttcgacctc
gaggttccctccaacatcgttgaggtcgtcttcaatgtggacaactcgcgcatggcagtt
ctgcatcgccagggactagaactcttccagtgggagaccaaaggagagcgtgcgcttcgc
ccaaagctactcggctcagcgacgttcgaatccttgctgggagatccaagagcgcgtgtg
cctctgcagacctgcttctctgcatctgacgaactctgtgttttggtcttcgaccaggag
ctcaagattgaggtgtttaacttcacgccctctacttcgacatttagccttgccaatata
cacgagctgagtgatcttgaccctgtgtcatcaatctccagtcactgtggcctgtcggat
gcggaggcatatgcacaggatcgctctggaaagctctttagtctttctggtggtgcggga
ttgacgtctcttggacgacagctgccagcgccgcttgcatggcaacagctcgtcaacatc
gaggatcaatctgtgtctattggtatgactcgcaatggccacttattcgcagacacacac
ctcctggcgaagaattgcacatcatttgtggtgacagatgcccacattatctttacgaca
aataatcactttgtcaagtttgtccatcttgtcagtcctgacgagatggaggtccctggc
gacaatccacaagacgacgagcggtgtcgtagcattgaacgcggcgcccgcctgatcacg
gcgatgccaacgaacatgagcattgttttgcagatgcccagaggaaacctcgaaacaatt
tacccccgtgccatggtcgtggcgggcatcagaaagcttgttgatgagaagaactacgca
cgcgccttttcatactgccgcacgcaacgtgtagatatgaacattctctacgaccaccag
ccggaacagtttcttgcacatgtcggtctcttcctggatcagctcaaggacgttacttat
attgatcttttcctctcgtctttacgggaagaagacgttacgcaatccatgtacaaggac
accaaacggaccgccgaccgcccatcagaaatttcgcctgatgttctcgcgggcgaaaat
gattccaagtcaaaagtcaacaaaatttgtaactcaatactaaagagcctgcagagcaaa
aaggatacgaacctccagaacatcatcactgctcacgtctgcaaagtgccgccagcgctc
gatgacggacttaccctgacaacgctctgggtctttacaacccgggaactagctttgcta
gtgctcagcaaatcacaaagggatccgcgcgagtatctgcccttcatccaggacttgcac
cagctcccaacccttcgccgccatttccaaatcgacgaccatctcgaacgacgcggcaag
gccctcgtacacctcaagagtctggatgtctttgacgaattgcaacaatatgtcgtcaag
tatgccctttatcaagaagcgctggacctctaccgttacgacaaacccaagcaccgtacc
ctcaccaatctttttgccgagcattcagagtctgggtccaaataccgcgatgcaggcctt
gcatacgaattcctggagaattactccaaagccacagcttgctaccgcgcctcaggcgct
tccagttggcgagagtgtctatacgccgcccagcagcaaacacccgcactttctcccgat
gccctgtcggatctcgcgtcttcgcttgcggacgccctcactgaggctaaagatcacaca
tccgctgctaccatctacatcgaatacctctcctccatcgagaccgccattcgctccctc
tgcaaaggctcccagtttgccgaggccctgcgtctcatctcccagaaagcccgcctcgac
ctgttgtcgactgttttcgaccccgcgctcgttgacgcgctcagcagcacgaccgaccta
ctcgccgattgcaaggcccagctccgcgctcaggtaccgcgcatcatggagctccgccgc
cgtgcagaggaggacccgctcgctttctacgagggcgagcgtgggccggccggcgccgac
attccctga
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