KEGG   Verticillium alfalfae: VDBG_05409
Entry
VDBG_05409        CDS       T02227                                 
Name
(RefSeq) replication factor C subunit 1
  KO
K10754  replication factor C subunit 1
Organism
val  Verticillium alfalfae
Pathway
val03030  DNA replication
val03410  Base excision repair
val03420  Nucleotide excision repair
val03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:val00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    VDBG_05409
   03410 Base excision repair
    VDBG_05409
   03420 Nucleotide excision repair
    VDBG_05409
   03430 Mismatch repair
    VDBG_05409
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:val03032]
    VDBG_05409
   03400 DNA repair and recombination proteins [BR:val03400]
    VDBG_05409
DNA replication proteins [BR:val03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    VDBG_05409
DNA repair and recombination proteins [BR:val03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     VDBG_05409
SSDB
Motif
Pfam: RFC1 RCF1-5-like_lid
Other DBs
NCBI-GeneID: 9531280
NCBI-ProteinID: XP_003004296
UniProt: C9SKT2
LinkDB
AA seq 342 aa
MDEVDGMSAGDRGGVGALAKYCKKTEVPLILICNERRLPKMKPFDHVAMDIQFRRPTVDQ
VRSRIMTICHREGLKLPPPVVDALIEGSNKDIRQIINMISTAKLDQSAMDFDQGKAMTKA
WEKHVVLKPWDICQKMLGGGLFAPSSNATLNDKIELYFNDHEFSYLMIQENYLRCKPMAL
NNRGYNKREENLKALELFDQAAESISDGDLVDRMIHGPQQQWSLMPTHAIFSTVRPASFI
AGQLMGSNFTSWLGNNSKTGKLNRFIREIHAHMRLRSSGDANEIRQQYLPVLWERIIRRL
DIEGKDSVSDIIDLMDSYYLTRDDFDAMKELGTIKCPTLFLS
NT seq 1029 nt   +upstreamnt  +downstreamnt
atggacgaggttgacggcatgtcggccggtgatcgcggcggtgtcggagctctggcgaag
tactgcaaaaagacagaagtgcctctgattctcatctgcaacgagcgtcgtttgcccaag
atgaagcccttcgatcatgttgccatggacattcagttccgacgaccgacagtcgatcag
gttcgatctcgtatcatgaccatctgccacagggagggactaaagcttccccctccagtg
gtcgatgcgttgatcgaaggcagcaacaaggatattcgtcaaatcatcaacatgatttcg
acagcaaaactcgaccagtcagccatggatttcgaccaaggcaaggccatgaccaaggct
tgggagaagcatgtcgttctgaagccctgggacatttgccagaagatgctcggaggcggc
ctcttcgcgccttctagcaatgccacgctcaatgacaagattgagctctacttcaacgat
catgagttcagctacctgatgatccaggaaaactatcttcgatgtaagcccatggcgttg
aacaacagaggttacaacaaaagggaagagaacctcaaggcgctcgaactttttgatcaa
gcggcagagagcatcagtgacggtgatctcgtcgatcgcatgatccacggaccgcagcaa
cagtggagtctcatgccaacgcatgcaatcttcagtaccgtacgccctgccagtttcatc
gccggccaactcatgggatccaactttacctcgtggcttggcaacaacagcaagacgggc
aagctcaaccgattcatccgtgagattcatgctcatatgcgactgaggtcctctggtgac
gcgaatgagattcgccagcaataccttcctgtcctgtgggaacggattatccgccgcctt
gacattgagggcaaggacagtgtctcggacattatcgatcttatggacagctactacttg
actcgcgatgactttgatgcgatgaaggagttaggtacaatcaaatgtcccaccctgttc
ctttcatga

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