Verticillium alfalfae: VDBG_05409
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Entry
VDBG_05409 CDS
T02227
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
val
Verticillium alfalfae
Pathway
val03030
DNA replication
val03410
Base excision repair
val03420
Nucleotide excision repair
val03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
val00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VDBG_05409
03410 Base excision repair
VDBG_05409
03420 Nucleotide excision repair
VDBG_05409
03430 Mismatch repair
VDBG_05409
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
val03032
]
VDBG_05409
03400 DNA repair and recombination proteins [BR:
val03400
]
VDBG_05409
DNA replication proteins [BR:
val03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
VDBG_05409
DNA repair and recombination proteins [BR:
val03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
VDBG_05409
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
RCF1-5-like_lid
Motif
Other DBs
NCBI-GeneID:
9531280
NCBI-ProteinID:
XP_003004296
UniProt:
C9SKT2
LinkDB
All DBs
AA seq
342 aa
AA seq
DB search
MDEVDGMSAGDRGGVGALAKYCKKTEVPLILICNERRLPKMKPFDHVAMDIQFRRPTVDQ
VRSRIMTICHREGLKLPPPVVDALIEGSNKDIRQIINMISTAKLDQSAMDFDQGKAMTKA
WEKHVVLKPWDICQKMLGGGLFAPSSNATLNDKIELYFNDHEFSYLMIQENYLRCKPMAL
NNRGYNKREENLKALELFDQAAESISDGDLVDRMIHGPQQQWSLMPTHAIFSTVRPASFI
AGQLMGSNFTSWLGNNSKTGKLNRFIREIHAHMRLRSSGDANEIRQQYLPVLWERIIRRL
DIEGKDSVSDIIDLMDSYYLTRDDFDAMKELGTIKCPTLFLS
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggttgacggcatgtcggccggtgatcgcggcggtgtcggagctctggcgaag
tactgcaaaaagacagaagtgcctctgattctcatctgcaacgagcgtcgtttgcccaag
atgaagcccttcgatcatgttgccatggacattcagttccgacgaccgacagtcgatcag
gttcgatctcgtatcatgaccatctgccacagggagggactaaagcttccccctccagtg
gtcgatgcgttgatcgaaggcagcaacaaggatattcgtcaaatcatcaacatgatttcg
acagcaaaactcgaccagtcagccatggatttcgaccaaggcaaggccatgaccaaggct
tgggagaagcatgtcgttctgaagccctgggacatttgccagaagatgctcggaggcggc
ctcttcgcgccttctagcaatgccacgctcaatgacaagattgagctctacttcaacgat
catgagttcagctacctgatgatccaggaaaactatcttcgatgtaagcccatggcgttg
aacaacagaggttacaacaaaagggaagagaacctcaaggcgctcgaactttttgatcaa
gcggcagagagcatcagtgacggtgatctcgtcgatcgcatgatccacggaccgcagcaa
cagtggagtctcatgccaacgcatgcaatcttcagtaccgtacgccctgccagtttcatc
gccggccaactcatgggatccaactttacctcgtggcttggcaacaacagcaagacgggc
aagctcaaccgattcatccgtgagattcatgctcatatgcgactgaggtcctctggtgac
gcgaatgagattcgccagcaataccttcctgtcctgtgggaacggattatccgccgcctt
gacattgagggcaaggacagtgtctcggacattatcgatcttatggacagctactacttg
actcgcgatgactttgatgcgatgaaggagttaggtacaatcaaatgtcccaccctgttc
ctttcatga
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