Verticillium alfalfae: VDBG_05443
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Entry
VDBG_05443 CDS
T02227
Name
(RefSeq) nucleolar protein NOP58
KO
K14565
nucleolar protein 58
Organism
val
Verticillium alfalfae
Pathway
val03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
val00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
VDBG_05443
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
val03009
]
VDBG_05443
Ribosome biogenesis [BR:
val03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
VDBG_05443
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nop
NOP5NT
CCDC71L
Motif
Other DBs
NCBI-GeneID:
9531315
NCBI-ProteinID:
XP_003004330
UniProt:
C9SKW6
LinkDB
All DBs
AA seq
598 aa
AA seq
DB search
MSLFVLAETPAGYGLFKAADKKLLKREELTSGPTSSEQINDMLKLKSFVKFDSSAIAVEE
ASGLREGRVPPMLANLLNEIKDEKKASLAVADVKLGAAIGKLPDLDIKAVSDAATLDLFR
AVRENLSSLIPGLADETVDRMALGLSHSISRHKLKFSADKVDAMVVQAIKLLDDLDKELN
VYAMRTKEWYGWHFPELAKILNDNLAYARLVDLVGMRENLADADLSDILPEELETPVKTA
AEISMGTEITPDDLENIQLLARQVISYSEYRTQLSSYLETRMRALAPNLTALVGTLVGAR
LIAHAGSILSLAKAPSSTIQIYGAEKALFRALKTKHDTPKYGIIYHSSLVGQATGKNKGK
IARSLAAKTALGLRVDALADFDGEDADEEERGMLGLTSRIKLENLLRKLEGKPPLPKGAN
IAPDGSLTAPAQFTLNEVRKYNADADGVDGAEVNGKADKKAKKAKKALIQEVEMKDADSE
AEDSDDDMEDASGSPSIGSVSDDTDGEKPSDKAERQGPEGPSVTPRLPRGDVELGPDGQP
VVFSKKELKKLRKAEEKADETPSKSDAEGKKKRKHEDAEEATPKKEKKQKKKRQSLGA
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgtccctcttcgttctcgctgagacgcctgcgggctacggcctgttcaaggctgccgac
aagaagctcctgaagcgcgaggagcttacttccggtcctacctcttccgagcagatcaat
gacatgctcaagctcaagtcttttgtcaagttcgacagctccgccattgccgtcgaggaa
gccagcggactccgcgagggtcgcgttcccccgatgcttgccaatcttctcaacgagatc
aaggacgagaagaaggcttcgctggccgtcgccgatgtcaagctgggtgctgccattggc
aagcttcccgacctcgacatcaaggcggtttccgacgctgccacattggaccttttccgt
gccgttcgcgagaacctttcttccctgattcccggtctcgccgatgaaactgtcgaccgc
atggctctgggtctttcccactccatctctcgccacaagctcaagttctccgccgacaag
gtcgatgccatggtcgtccaggccatcaagcttctcgatgatctcgacaaggagctcaac
gtctacgccatgcgaaccaaggagtggtatggctggcacttccctgagctggccaagatc
ctcaacgataaccttgcctacgcccgtcttgtcgacctcgtcggcatgcgcgagaacctc
gccgatgccgacctttccgacatcctccctgaggagctcgagacccccgtcaagaccgct
gccgagatcagcatgggtaccgaaatcacgcccgacgatctcgagaacatccagctcctt
gcccgccaggtcatctcgtactctgagtatcgtactcagctgtcctcgtacctcgagact
cgcatgcgcgctcttgcccccaacctgacggcactcgtcggcactctcgtcggtgcccgc
ctcatcgcccacgctggttccattctcagccttgccaaggcgcctagttccactatccag
atctacggtgccgagaaggctctgttccgcgcgctcaagaccaagcacgacacgcccaag
tacggtatcatctaccattcttctctcgttggtcaggctactggcaagaacaagggcaag
atcgcccgttcgctcgctgccaagacggcccttggcctccgtgtcgatgccctggccgac
tttgatggcgaagatgccgatgaggaggagaggggcatgctcggtctcaccagccgcatc
aagctcgagaacctactccgcaagctcgagggcaagcctcctctgcccaagggcgccaac
attgcccccgatggctcgctcactgcccctgctcagttcaccctgaacgaggtcaggaag
tacaacgccgacgctgatggtgtcgacggtgccgaggttaacggcaaggccgacaagaag
gccaagaaggccaagaaggctctgatccaggaggtcgagatgaaggatgccgacagcgag
gccgaggactcggacgacgacatggaggatgcctctggctctcccagcattggttccgtc
tcggacgacacggatggcgagaagccttccgacaaggccgagcgtcaaggcccagaaggc
ccgtccgtcacgccgcggctgccgcgcggtgatgtcgagctcggccccgacggccagcca
gtcgtgttcagcaagaaggagctgaagaagctccgcaaggctgaggagaaggccgacgag
accccctccaagtctgatgccgagggcaagaagaagaggaaacacgaggacgccgaggag
gcgacgccgaagaaggagaagaagcagaagaagaagcgccagtcgctgggtgcctaa
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