Verticillium alfalfae: VDBG_05536
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Entry
VDBG_05536 CDS
T02227
Name
(RefSeq) DNA damage-responsive transcriptional repressor RPH1
Organism
val
Verticillium alfalfae
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
JmjC
zf-HC5HC2H_2
zf-HC5HC2H
JmjN
Motif
Other DBs
NCBI-GeneID:
9531412
NCBI-ProteinID:
XP_003004423
UniProt:
C9SL59
LinkDB
All DBs
AA seq
1504 aa
AA seq
DB search
MSTEAPSALASAPTPVSLAPEAAQTQTGCTNDVGNTDGHTQDRVANAEHDAPADHIECAK
PTFLHSPPDSNNAAKSDGSDSELSELDDDAVDPADEPPKEDDIGEVEPDHYSGTVPVFRP
TMHQFKDFKRFMEKIDRYGMQSGIVKIIPPEEWKNSLPELDDLVKQVRVREPIKQDIMGS
GGTFRQVNILHQRSYNVPQWRKLCEQSEHQPPARRGERRANADKPRPATRTRAAASSAPK
PRAAPAKKRGGKRGAKNNGKQKKDADDAETEDRPMTPVSPRGDAEEGKIKTEAVVDSVET
GDAEEEEDEATPTVGRMGRMGGARPSKGATQSVSARRKYSKREGSAKIDEEAFKDFDYRM
DVSDYTPERCEELERAYWKTLTYAPPLYGADLMGTLFDESTDTWNLNKLPNLLDVLGSKV
PGVNTAYLYLGMWKATFAWHLEDVDLYSINYLHFGAPKQWYSISQADAKRFEAAMKNIWP
TDAKACDQFLRHKGYLISPQQLKQNYNITVNKCVSYPGEFVVTYPYGYHSGYNLGYNCAE
AVNFALDSWLPMGKIAKRCQCPQAQDSVWIDVYDIERKLRGEELEYEEYTDDDGDEEEDE
DMEEPESTNAPGSRAVKIKAPSRKRKRDAKDKDEKKVKKIRLRIKARAEPPCCLCPNDIA
SAELIPTNDGRKAHRMCAHYLPETYIETIDDKEVVCNVANVAKDRLDLKCLFCRSKRGAC
FQCSQKKCARAYHATCAAAAGVFVEEAEVSVWGEDGTEYKEQAFEFSCRFHRTKRDKKVD
GDSLDDDERILNAAKAVKEGEICQLQYFKGEIFAGVVVENRKDERMLLVDILPNGARVEV
EWKWLLVADPSDYHLPKASAKAIPMPTSQKAKQELNAKRAVDEVPRKDDTFVDGGFTWAE
FHTCEPFHNKDQVKADLNKDMQLWYYLGKTSTEAKAQYTESPTLQRHNPRSNYLDTLPKP
AKPPKPVSVTQRRPSQVPQRPSIPGPPRPSPLSTSSVPVPVQGPAQGPMPMPSLPNAVTV
EKPYVYKPRKPIDGVWFKTQQFTTQQFAPKMSNSPSPAPNGHQSGHGFDSQFAGHQHAQT
SQYSQHRFIPSYAPAYNPQTAAYGAQRNAPPNYGQPQQQQQQQRTWSTPSSMNQPSPYQS
GQHTSQQRSQQGQQGTSYTDSNRTLQVHQYQPVIQQSSTPSQPAHVSPAQYAATQQSATN
SQKQSQLQSQPFNQAQQQVQVQHLQQSPASFTAGQAQTHVSSRARKERAPAPIPTPGPTK
ATPQAQPQTPEVARTPTSALPSPTSSGAVGSINSAQSPNAQSKTARISETPVPLPHQKAA
TSTPRTKASGAMFGHASTTSPTKVVVSTPESTPAQPLVPSQTSTSTDSISVAAQQASVAH
TQDAAPSGPPSQPSQISNRAAVETPVPLPRLPGKVTPVPLPPQALQVLSTGHSVSKPSGY
TGEAISETPILPPIRAPMATTQTSPEVDDMDRVGFPEVPHDSMALVEQMMQNLRRASIRH
THTN
NT seq
4515 nt
NT seq
+upstream
nt +downstream
nt
atgtcgactgaggcccccagtgccctggcgtcagcgcccaccccggtctctcttgcgcca
gaggcagcgcagacccagaccggttgcaccaacgacgtcggcaacacagacggccacacc
caggaccgcgttgcgaatgctgaacacgatgctcccgccgaccacatagaatgcgcaaag
cccaccttccttcactcgccgcctgatagcaacaatgcggccaagtccgacggctcggat
tccgagctcagcgaacttgacgatgacgccgtggaccccgccgacgagccgcccaaggag
gacgatattggcgaagtcgaacccgaccactactcgggcaccgtccctgtgttccggccg
accatgcatcagtttaaggacttcaagcgatttatggagaagatagaccgctatggaatg
cagtccggcatcgtcaagattattccgcccgaggagtggaaaaactctctgcccgaactc
gatgacctcgtcaagcaggtccgtgtgcgagaaccgatcaagcaagatatcatgggctcc
ggcggcaccttccgacaggtcaatattctccaccagcgatcctacaacgtaccccagtgg
cgcaagctgtgcgagcagagcgaacaccagccgcccgcccgcaggggtgagcgccgcgcc
aatgcagacaagccgaggcctgcgactcgaacccgagctgccgcgtcgtccgcgccgaaa
cctagggcagcacctgcgaagaagcgcggcggcaagcgcggcgccaagaacaacggcaag
cagaagaaggacgctgacgatgccgagacggaagatcgacctatgacgcccgtctcccca
agaggagatgctgaagagggcaaaatcaagacggaggctgtggtagactcggtcgagact
ggggatgccgaggaggaggaagacgaagccactcctaccgtcggcaggatgggccgtatg
ggtggcgcgaggccctccaagggcgccacgcagtccgtctcggcgcgccggaagtacagc
aaacgagagggttctgccaagattgacgaggaagccttcaaggatttcgactaccgcatg
gacgtgtccgactacacgccagagagatgcgaggagctggagagggcatactggaagacc
ctgacctacgcgccccctctatacggtgctgatctgatgggtacgctattcgacgaatcc
accgacacctggaacctcaacaaactccccaacctgctcgacgtcctgggcagcaaggtc
ccgggagttaacacagcatatctctatctcggcatgtggaaggccacttttgcctggcat
ctcgaggatgtcgacctatacagcatcaactatctgcactttggcgcgccgaagcagtgg
tacagcatctcgcaggccgacgccaagcgatttgaggcagccatgaagaacatttggccg
actgacgccaaggcctgcgatcagttcctccgccataagggctacctcatctcaccacag
cagctgaagcaaaactacaacattaccgtcaacaagtgcgtctcctatcctggagagttc
gtcgtcacatatccatacggctaccattcgggctacaacctcggctacaactgcgcggag
gctgtcaactttgctcttgactcatggcttcccatgggcaagatcgccaagcggtgccag
tgtccccaggcgcaagacagtgtgtggatcgacgtatacgatatagaacgcaagctgcga
ggcgaggagctggagtacgaagagtacactgatgatgatggcgatgaagaagaggatgag
gacatggaggagcctgaatccaccaatgcaccaggatctcgcgctgtcaagatcaaggct
ccgtctcgcaagcgcaagcgtgacgcgaaggacaaggatgagaagaaggtgaagaaaatc
aggctccgaattaaggcacgcgccgagccgccttgttgtctttgtcccaacgacattgcc
tccgccgagctcattcctactaacgacggacgcaaggcgcaccgcatgtgcgcccactat
cttcccgagacctacatcgagaccatcgacgacaaagaggttgtctgcaatgtcgctaat
gtcgccaaggacagacttgatctcaagtgcctcttctgtcgatccaagcgcggagcctgc
ttccagtgttctcaaaagaagtgcgcgcgcgcgtaccatgctacttgcgctgccgcagcc
ggtgtgtttgtggaggaggccgaagtctccgtctggggtgaagacggcacagaatacaag
gagcaagccttcgagtttagctgtcgtttccatcgcaccaagagagacaagaaggtggac
ggcgactccttggatgacgacgagcgcatcctcaatgcagccaaggctgtcaaggaaggc
gaaatttgccagctgcagtacttcaagggggagattttcgctggcgtggttgtcgaaaat
cgcaaagatgagcgtatgctgttggtggatattcttcccaatggtgcccgcgtcgaggtt
gagtggaagtggctccttgtggctgatccctccgactaccatcttccaaaggcctctgcc
aaagctatcccgatgcccacttcgcaaaaggccaagcaagagctcaacgccaaacgcgcc
gttgacgaggtgccaaggaaagatgatacctttgtggacggcggcttcacctgggctgaa
tttcacacttgcgagccttttcacaacaaggatcaggttaaagctgacctcaacaaagat
atgcagctgtggtactaccttggcaagacgtcgaccgaggccaaggcgcagtatacggag
agccctacgctgcagcgacacaacccgcgcagcaactaccttgacacactgccaaagccc
gcgaagcctcccaagcctgtatcggtcacgcagcgtcggccgtcgcaagtgcctcaacga
ccttcaattcctggtcccccccgcccgtcgccgctttcgacttcctcggtgccggtaccc
gtgcagggcccggcgcaaggcccaatgccaatgccgtctttgccaaatgcagtcaccgtc
gagaagccatacgtgtacaagccgcgcaagcccatcgacggtgtttggttcaagacgcaa
cagttcacaactcaacaatttgctcctaaaatgagcaactcgccgtctcctgcgcccaac
ggccaccagtcgggccatggctttgattctcagttcgctggccatcagcacgctcagaca
agccagtattcacagcatcgcttcattccctcttatgctcctgcctataacccgcagacc
gccgcctatggtgcgcaacgaaatgcaccaccgaactatggacaaccgcagcagcagcag
cagcagcaaagaacctggtcgacgccctcttcaatgaaccagccatcaccgtatcaatct
ggccaacacactagccagcaacgcagtcagcagggccaacagggcacatcatacacagac
agcaaccgaacgctccaggtgcaccagtatcagcccgtgattcagcagtcaagcactccg
tcacagccagcgcatgtctctccagcgcaatatgcagctacgcaacaaagtgcgactaac
tcgcagaaacaatcgcaactgcaaagtcagcctttcaaccaagcccagcagcaggtgcag
gtacagcatctgcagcagtcgccagccagcttcacagctggccaggctcaaacccatgta
tcgagccgcgcgcgaaaggaacgggctccggcaccaataccgacaccaggaccgacaaag
gcaacgccccaggcccagcctcagacaccagaggtcgccaggacacccacaagtgcattg
ccttctcctacgtccagtggtgctgtgggttccatcaactctgcacaatcgccaaatgca
cagagcaagacggctcgaatttcggagacgccagtgcctcttcctcatcagaaagcagcc
acctcgacaccacgaacgaaagccagtggagcaatgttcggccacgcttctaccacttca
cccaccaaggtcgtggtttcgactcccgaatcgacccccgcgcagcctttggtaccatcg
caaactagcacgagcaccgattcgatatctgttgcggctcaacaagcctcggtagcccat
acacaggatgctgctccgtccgggccaccctctcaaccgtcgcagatatccaacagagct
gccgtcgagactccggtgcctttgccgagacttcctggcaaggtgacgccggtgccgctg
cctccgcaggctttgcaggttctctcaaccggccattctgtgtcgaagccctcgggatac
acaggcgaggcaatctcggaaacgccgatactgccgccgatcagggcgcccatggcaaca
acgcaaacctcgccagaggttgacgatatggacagggtgggttttccggaggtgccccac
gattcgatggcgttggtggagcagatgatgcaaaaccttcgacgtgcgagcatcagacat
actcacacgaactag
DBGET
integrated database retrieval system
