KEGG   Verticillium alfalfae: VDBG_05542
Entry
VDBG_05542        CDS       T02227                                 
Name
(RefSeq) hypothetical protein
  KO
K03505  DNA polymerase delta subunit 4
Organism
val  Verticillium alfalfae
Pathway
val03030  DNA replication
val03410  Base excision repair
val03420  Nucleotide excision repair
val03430  Mismatch repair
val03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:val00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    VDBG_05542
   03410 Base excision repair
    VDBG_05542
   03420 Nucleotide excision repair
    VDBG_05542
   03430 Mismatch repair
    VDBG_05542
   03440 Homologous recombination
    VDBG_05542
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:val03032]
    VDBG_05542
   03400 DNA repair and recombination proteins [BR:val03400]
    VDBG_05542
DNA replication proteins [BR:val03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase delta complex
    VDBG_05542
DNA repair and recombination proteins [BR:val03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase delta complex
      VDBG_05542
   MMR (mismatch excision repair)
    DNA polymerase delta complex
     VDBG_05542
SSDB
Motif
Pfam: DNA_pol_delta_4
Other DBs
NCBI-GeneID: 9531418
NCBI-ProteinID: XP_003004429
UniProt: C9SL65
LinkDB
AA seq 193 aa
MPTNRRSTGGARARPGPNKGQSTISFSNKVSKPVPRQELKKAAVTKGDRIVTHAKKEEEV
PEAVEIEVEPEVEQPEPKVEVPQKTEVQIRAEKTTDAQINKYWRNIEAERIAKRVHVEDL
STGEKVLRYFDVSSQYGPCVGIQRMRRWERANKLGLNPPIEVLAVLLKEQKEGSQSERAH
MDAILNSTAVGST
NT seq 582 nt   +upstreamnt  +downstreamnt
atgccgacaaaccgcagatcaactggcggcgctcgcgcccgccctggacccaacaaaggt
caatcgaccatcagcttctccaacaaggtttcaaagcctgtacctcggcaggaactgaag
aaagccgctgtcaccaagggcgaccgcattgttacacatgccaaaaaggaggaggaggtt
cctgaggccgtcgagatcgaggtcgaacctgaggtagagcagccggagccaaaggtcgag
gtgccacagaagaccgaggtccagatccgcgccgagaagacgaccgatgcgcagatcaac
aagtactggcggaacattgaggcggagcgcattgccaagagggtgcatgtggaagacttg
agcacgggggagaaggtgctgcggtatttcgacgtcagctcgcagtacgggccctgtgtc
ggaatccaacggatgaggcgctgggagagggccaacaagctcggcctcaaccctcccatc
gaggttcttgccgtgctgctcaaggagcagaaggagggcagccaatctgagcgcgcgcat
atggatgcgattctcaactccacagcagtcgggtcaacatga

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