Verticillium alfalfae: VDBG_05612
Help
Entry
VDBG_05612 CDS
T02227
Name
(RefSeq) ATP-dependent RNA helicase dbp6
KO
K14807
ATP-dependent RNA helicase DDX51/DBP6 [EC:
5.6.2.7
]
Organism
val
Verticillium alfalfae
Brite
KEGG Orthology (KO) [BR:
val00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
val03009
]
VDBG_05612
Enzymes [BR:
val01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
VDBG_05612
Ribosome biogenesis [BR:
val03009
]
Eukaryotic type
Pre-60S particles
Helicases
VDBG_05612
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
ResIII
BUD22
UvrD-helicase
Cwf_Cwc_15
Motif
Other DBs
NCBI-GeneID:
9531489
NCBI-ProteinID:
XP_003004499
UniProt:
C9SLD5
LinkDB
All DBs
AA seq
858 aa
AA seq
DB search
MYNRYVPSKGASSASPPHPQQSTASHGSTSQPSTDYARYVPPTKGAKTTATQSPSINSHD
ALSPATKRKHGDASTNGAESPAPKPKKSKQSEDVEKAEKKEKKKREREARDKPKKKKPAR
EDNGDDEDDEEDKVPSRFASVLAKKAKSIKAPAPLPEGAEAMNVDEDEAEDIEMHGLDPL
PQPEPVAADTTKMSYETLPPWLAAPIRVAADTRTPFPEIGINDRSAKILESKGFKDAFAV
QTAAIPLLLPSCKHRQGDLLVAAATGSGKTLAYALPIVRDISQGQVTRLRALVVLPTREL
VNQAQEVFQLCAAAFDARDQKRVRIGISIGSHQLKNDQANLVEQTERYDPKAYADAVKRD
REAWTTLEDADAEDKLLAQSFQGWLDVVMPKLRTNKFSARDFPDSNLTGVRKVVLSATLT
RDLSLLGSLQLRRPQLIVLEGGKADGATQVAEHTLPSSLKEFATRVYDTRLKPLYLLDLL
QGKHLLSPTDTASKNKKTPAKTAAAAAAADDDDTSSEDESDTSSDGSSDTSSDSDSDSDS
DTPKASFKKTALIFTKSNESAIRLSRLLSLLAPSLAPLIGTLTSTQKTSHRRRVLASFYS
RHPPHPSAAGYVHRVGRTARAGRQGRAFTLVETRESGWFWGAVAKWEGIRRTEEVGRLVI
VEKDAEDGGFGGERMERYEKALEELGKEASEVRKHRLMYAHGEESAVVLHVAKEHDVTIG
MNLARKARVIALADSTLSRRCQAFTSLVWPDDRSRTGVRRSPPESDGLIRIWGGQPTVIG
EGRSRRAMWVWFSMSPLQGDVSTNVDVERCAELCRLDWRRPVFSRLKRELRRGDGDTTLQ
TNEIGDAGLVMEFVVRTG
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgtacaatcgatacgtcccgtcaaagggagcatcttctgcatcaccaccacatcctcaa
cagagcaccgccagccatggctcgaccagccagccctccacagactacgctcgttacgta
cccccaacgaaaggagcaaagacgacggcgacccagtctccatcaataaactcgcatgat
gcgctatctcccgcgacaaagcgcaagcatggcgatgcctctacgaacggcgcagaaagc
cctgcgccgaaacccaagaagtccaaacagtccgaagatgtagagaaagccgagaagaag
gagaaaaagaagagggaaagggaggcacgagacaagccaaagaagaagaagcctgctcga
gaggacaatggggatgacgaagacgacgaagaagacaaggtgccctcgcggttcgcatca
gtattggcaaagaaggccaagtcgatcaaggccccggcaccactgcccgagggagctgag
gcaatgaatgtcgacgaagacgaagcggaggatatcgagatgcacggcctggacccccta
ccgcaaccggagcctgtggccgccgacacgaccaagatgtcctatgaaaccctaccgcca
tggcttgcagcaccgatacgcgttgcagccgacaccagaactccgttccccgagatcggc
atcaacgaccgttcagccaagattctcgagtcgaaaggcttcaaggacgcctttgcggtg
cagacggccgcgataccattgcttttgccctcgtgcaagcaccgccagggtgatcttctc
gtcgcggccgctaccggttccggaaagacgttggcgtatgcgttgccgattgttcgcgac
atcagccagggccaggtaacgaggttgcgagcgcttgtggtgctgccgacccgagaactt
gtcaatcaggctcaggaggtcttccagctctgcgccgctgcttttgatgcccgtgatcag
aagcgcgtacgcatcgggatttcaattggcagccatcaactgaaaaacgaccaggcgaat
ctggtagagcagacggaacgctacgaccccaaggcatatgcagacgctgtgaagagggac
cgcgaggcttggactacacttgaggatgccgatgctgaagacaagctgctggcgcaaagc
ttccagggttggttggacgtggtcatgcctaagctgcgcaccaacaagttcagcgcacgc
gacttccctgactcgaatctgacaggcgtccgcaaggttgtgctcagtgcgacgctcacc
cgagatctcagtctgctcggcagtctgcagctcaggaggccacagctcatcgtgctcgag
ggcggcaaggccgatggcgcgacgcaggtggccgagcacacgcttcccagctcactcaag
gagtttgcgactagggtctacgacaccaggctcaagcctctgtacctgctcgacctgctc
cagggcaagcacttgctctcgcccacggacacggcatcgaagaacaaaaaaacccctgcg
aagacggcagcagcagcagcagcagcagacgacgacgacacttcatcagaagacgagtcg
gatacctcgtcggacggttcatcagacacctcatcggactcggactcggactcagactcc
gacacgcccaaggcctccttcaagaagacggcgctcatctttacaaagtccaacgaatcc
gccatccgtctctcccgcctcctctccctcctcgcgccctctctcgcgcccctcatcggc
accctcacatcgacgcagaagacatctcaccgccgccgcgtcctcgcctccttttacagc
cggcaccctccgcatccctccgccgcgggttacgtccaccgcgtgggccgcacggcgcgt
gcgggcaggcagggacgggcgttcacgcttgtggagacgcgcgagagcggatggttctgg
ggcgccgtggccaagtgggagggcatccggagaacggaagaggtcggacggttggtcatt
gtcgagaaggatgcggaagacggagggttcggcggggagaggatggagcggtacgagaag
gcattggaggagctggggaaggaagcgtccgaggtgcggaagcacagactgatgtatgct
cacggggaggaatcggcagtagtgctccatgtagccaaggaacatgatgttacaatagga
atgaacctggccaggaaagcccgggtcatcgccttggccgacagcacactatcccgccgg
tgccaggcattcacgtctctcgtctggccagacgaccggtcgagaaccggtgtccgtcga
tctccgccggagagcgatggcctgataagaatctggggtggccaacccacggttatcggc
gagggccgttctaggcgggcgatgtgggtctggttcagtatgtcgccgcttcaaggggac
gtttcgaccaacgtcgacgtggagcgttgtgcagaattgtgcaggcttgactggagacgt
ccagtattctcaaggttgaagcgagagctacgtagaggggatggggacacgacgctgcag
accaatgagattggtgacgcgggtttggtgatggaatttgttgtaaggactgggtag
DBGET
integrated database retrieval system
