Verticillium alfalfae: VDBG_05704
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Entry
VDBG_05704 CDS
T02227
Name
(RefSeq) replication factor C subunit 3
KO
K10756
replication factor C subunit 3/5
Organism
val
Verticillium alfalfae
Pathway
val03030
DNA replication
val03410
Base excision repair
val03420
Nucleotide excision repair
val03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
val00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VDBG_05704
03410 Base excision repair
VDBG_05704
03420 Nucleotide excision repair
VDBG_05704
03430 Mismatch repair
VDBG_05704
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
val03032
]
VDBG_05704
03036 Chromosome and associated proteins [BR:
val03036
]
VDBG_05704
03400 DNA repair and recombination proteins [BR:
val03400
]
VDBG_05704
DNA replication proteins [BR:
val03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
VDBG_05704
DNA Replication Termination Factors
ELG1-RFC complex
VDBG_05704
Chromosome and associated proteins [BR:
val03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
VDBG_05704
DNA repair and recombination proteins [BR:
val03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
VDBG_05704
Check point factors
HRAD17(Rad24)-RFC complex
VDBG_05704
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
AAA_24
AAA_22
AAA_assoc_2
AAA_16
AAA_30
AAA_11
AAA_5
AAA_19
RCF1-5-like_lid
AAA_28
DUF815
AAA_14
RuvB_N
SLFN-g3_helicase
AAA_3
Sigma54_activat
ResIII
DNAX_ATPase_lid
DEAD
AAA_18
AAA_7
Mg_chelatase
TniB
ATPase_2
AAA_25
nSTAND3
bpMoxR
RNA_helicase
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
9531582
NCBI-ProteinID:
XP_003004591
UniProt:
C9SLM7
LinkDB
All DBs
AA seq
391 aa
AA seq
DB search
MSDFEDEMDVDVPVSKDITFSSEATKGKRSAANLPVEAEDSLPWVEKYRPATLADVSGHH
DILATINKFVDKNRLPHLLLYGPPGTGKTSTILALARRIYGPENVRQMVLELNASDDRGI
DVVREQIKTFASTKQIFTSARSGSGSSSGAAGYKLIVLDEADAMTNTAQMALRRIMEKYT
ANTRFCIIANYAHKLSPALLSRCTRFRFSPLKEGDIRVLVDRVVDEEGVRIRPDATDALV
RLAKGDMRRALNVLQACHASSTPLRGPGEPKVPDAQIVRDLITTETIYQCIAAPPPDAVQ
EILQALLSTADVTSCLSTINSLKVARGLALADIITSLSEEIYKLEVKPEVMISWLDGLAN
IEHRVAGGAGEAVQTGAVVVVVRSGVELMNT
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgtcggactttgaagatgagatggacgttgatgtccccgtctccaaggacatcacattc
tcttccgaagcgaccaagggcaagcgcagcgccgccaacctaccagtcgaggcggaagac
agcctgccatgggtcgaaaagtaccggcccgccacgcttgccgacgtctccggccaccac
gatatcctcgcgacgatcaacaagtttgtcgacaagaaccgcctgccgcacctgctcctc
tacggcccccccggcacgggcaagacgtcgacgatcctggcgctggcgcggcgcatctac
ggccccgagaacgtgaggcagatggtgctggagctcaacgcgtccgacgaccgcggcatc
gacgtggtgcgtgaacagatcaagacgttcgcgtcgacaaagcaaatcttcacgtcggcg
cggagcggcagcggcagcagctcgggggcggcgggttacaagctcatcgtgctcgacgag
gccgacgccatgacgaacacggcgcagatggcgctgcggcgcattatggagaagtacacg
gccaacacgcgcttctgcatcattgccaactacgcgcacaagctctcgccggcgctgctg
tcgcgctgcacacgcttccgcttctcgcccctcaaggagggcgacattcgcgtcctcgtc
gaccgcgtcgtcgacgaagagggcgtccgcatccggcccgacgccaccgacgccctcgtc
cgcctcgccaagggcgacatgcgccgcgccctcaacgtcctgcaggcctgccacgcctcg
agcacgccgctgcgcgggcccggcgagcccaaggtccccgacgcccagatcgtccgcgac
ctcatcaccactgagaccatctaccagtgcatcgccgcgccgccgcccgacgctgtccag
gagatcctgcaggccctgctgagcacggccgacgtcacgtcgtgcctgtcgaccatcaac
tcgctcaaggtggcgaggggcctggcgctcgcagacattatcacgtcgctgtcggaggag
atttacaagttggaagttaagcccgaggttatgatttcgtggctcgacggactggccaac
attgaacatcgtgtagccggtggagcgggcgaggcggttcagactggcgccgtcgtggtt
gttgtgagaagcggtgtcgagctgatgaacacgtag
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integrated database retrieval system
