Verticillium alfalfae: VDBG_05757
Help
Entry
VDBG_05757 CDS
T02227
Name
(RefSeq) DNA mismatch repair protein
KO
K08739
DNA mismatch repair protein MLH3
Organism
val
Verticillium alfalfae
Pathway
val03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
val00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
VDBG_05757
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
val03400
]
VDBG_05757
DNA repair and recombination proteins [BR:
val03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
VDBG_05757
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutL_C
Motif
Other DBs
NCBI-GeneID:
9531636
NCBI-ProteinID:
XP_003004644
UniProt:
C9SJN4
LinkDB
All DBs
AA seq
637 aa
AA seq
DB search
MAVRVKQRPSTMDKTALDRDFNNLVHDVVAVSLACAADVNLHVRDSGARNTVRLRPSPAD
TSVNDPPTRISRVLVQSGLADDVSYGTWVAVGGSTSSLSVKGSISLNAVATRRAQFISFG
IHPMAGGQGYGSLYEDANRVFANSDFENDKFSESQSKDTMPRKDLKSKRGLERWPMFSFR
VESTAPSPHNRSFEDILEQPRRLSQISDLIKIICFEFLKKHQFRPRALSSGRNLKRQASR
SDSTTIAKRAKTASSSQSRSRTSTPAPRTASPFDLWERVKVGKARQLMPKLNAYEAQSLP
LPLIPPVTVLETPRAPGGRSPFVDKEGRLLEKPFHEIGLPPSLSKQDSRGLQPPVIKNTP
KEAAERLSGENQSDVHLSDTRPLSVQTDGMSKVFSKCIRIRRDKTCEEPSEWLSGLLGSW
KNPVFPATEAPIHHMEEVTATAGTEVKCGGHGLGSSSVEMSSIKLQGQLSKQSLRDADVV
SQVDKKFILVKLRQETSSKFFREAGNNTMLVVVDQHAADERCKLEALMKGYFVLDNNAVL
RAETMVLSAPLTFELSSKECELLRRRTSHFEDWGIIYIITSTAQTSGSAQLSTIEVRSLP
PSILKRCMDEPKLLVDLLRHEVWRLEERRHMHSTVSL
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggcagtcagagtcaagcagcggccttctaccatggacaagacagctcttgacagggac
ttcaacaacttggtccacgacgtggtcgctgtgtcgctcgcatgtgccgctgatgtcaat
ttgcacgttcgggactcaggcgcccggaacacagtccgacttcgtccgtcacccgcagac
accagcgtcaacgatcctccaactcggatctcaagggtcctggtgcagtccggtctcgca
gatgatgtctcgtacggcacatgggttgctgtgggtggctcgacaagcagtctctctgtc
aagggttccatttccctgaacgcagtagcgacacgtcgagcccagttcatcagctttggt
attcatccgatggcagggggtcagggatatggatccctatacgaagacgcaaatcgtgtc
tttgccaactcggatttcgagaatgacaaattttcagagtctcaatccaaggataccatg
ccgcgcaaagatctgaagtcaaagagagggttagaacgttggcccatgttctctttccgg
gtggaaagtactgccccttcgccgcacaatcgatcctttgaagacatactggaacagccc
cggagattgtctcaaatatccgatctgatcaagattatatgcttcgaattcttgaagaaa
caccaatttcgtcctcgggcactgtcgtcgggacgcaacttgaagcggcaagcctctcgc
agcgacagcacgaccatcgccaagcgtgctaagaccgcgtcctcgtcccaaagtcgttct
agaacttcgacacctgctccgagaaccgcatcgccattcgacctctgggaaagagtcaaa
gttggcaaagcacggcagttgatgcccaagctcaatgcttatgaggcccagtcgttgccg
ttgccgctcataccgccagtcacggttctcgaaaccccccgagcgcctggtgggagaagc
cccttcgtcgataaagaggggcggctacttgagaagccatttcacgagatcggtctgccg
ccatctctatcgaagcaagattctcgaggcttgcagccgcctgtcatcaaaaacacccct
aaagaagctgccgaaaggctttcgggtgagaatcaaagtgatgtccatctgtcagatact
aggcctctttcagtgcagaccgacggaatgtcaaaagtcttctcaaaatgcatccgcatt
agaagagacaagacttgtgaagagccgagcgagtggctcagtggccttcttggatcgtgg
aagaacccagtatttccagccaccgaggctcctatccaccacatggaggaggtcacagcc
actgcgggtactgaagtcaaatgcggcggccatggcttgggaagctcctcggtcgaaatg
tcgtcgataaagctacagggacaattgtccaagcaaagtctacgcgacgccgacgtggtc
tctcaggttgacaaaaaattcatactcgtcaagttgcgacaagaaacaagctcgaagttt
ttccgtgaagcaggcaataacacaatgctagttgttgttgaccagcacgccgcagatgaa
cggtgtaaactggaggcattgatgaagggatactttgtcctggataacaatgccgtcctc
agagccgagaccatggtactgagcgcccctctcacgtttgagctgagtagcaaagagtgt
gagctactccgacggcgcaccagccacttcgaggactggggaataatctacatcatcaca
tcaacggctcagacctcaggatcggcccagctttctaccattgaagtacgtagtttgcca
ccaagtatcctcaagcgctgcatggatgagccaaagctgctggtggacctcttgaggcac
gaggtctggagactagaagagagaagacacatgcactccactgtatccttatag
DBGET
integrated database retrieval system