Verticillium alfalfae: VDBG_05852
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Entry
VDBG_05852 CDS
T02227
Name
(RefSeq) transcription initiation factor iif
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
val
Verticillium alfalfae
Pathway
val03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
val00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
VDBG_05852
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
val03021
]
VDBG_05852
Transcription machinery [BR:
val03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
VDBG_05852
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_beta_N
TFIIF_beta
DUF3591
Motif
Other DBs
NCBI-GeneID:
9537623
NCBI-ProteinID:
XP_003003410
UniProt:
C9SLS8
LinkDB
All DBs
AA seq
368 aa
AA seq
DB search
MADPTPVKSEPYIKPDPDAVASPSATPLDDDDLYEDAGDLEFYDASGASGTFNQAYLAKV
PKEIWDAWSNLPEDAEIEVGTMRQWDVIRPDGGVDHRFRMLLNSELAGHQLMPREYDLEM
GPELTRGTFVFSEEDLPGFKAKSKARNDAANNGIPAHLLRPKVDRPARKPFDRKARYQPF
YRKAIPKKTKIRARIQYEMGCKPVDNEESRAILQLKQMEAHKPKHTLKIVDHYQISGVIQ
QGSAAAQAKFGSFVKTTNPVKTSKQKKPANKATRMDETELREALLDAFTNRFQYWKMSVL
KATFNQPEAYLRQELEKIAVMNRSGPHSNEWEIKPEFKLIQNQALDQSAPDAVADDDDDM
DMEDVVLT
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atggccgaccccacgccggttaaaagcgaaccgtacatcaagccagaccctgatgccgtg
gcatccccgtctgcaacaccacttgacgatgacgacctctatgaagatgccggcgatcta
gagttctatgatgcaagcggtgcttctggcacgttcaaccaggcctacctagccaaagtt
cctaaagagatatgggacgcgtggagtaatcttcctgaggacgcggagatcgaggttggc
actatgagacaatgggacgtcatccgaccagatggaggagttgatcatcgcttcaggatg
ctcctgaattctgaattggcagggcaccagctcatgcccagggagtacgacttggagatg
ggaccagagctcacacggggaacctttgttttctccgaggaggacctccccggcttcaaa
gcgaagtcaaaagcgagaaacgacgcggcgaacaacggaataccagcacatctgctacga
ccaaaagttgacaggcctgcacggaagccctttgacagaaaggctcgctatcagcctttc
tatcggaaggccataccaaaaaaaacaaagatcagggcccgtatccagtacgaaatgggc
tgcaaaccagtagataacgaagagagcagggcaattctgcaactcaaacagatggaggca
cacaagccaaagcatacactgaagatcgtggatcattatcagatcagcggggtgattcag
cagggctcagccgctgcccaggctaaattcggctctttcgttaaaactacgaatccggtc
aagacgagcaaacagaagaagccagccaacaaagcaactcgtatggacgagacagaattg
cgagaggctcttctcgatgcttttaccaacagattccagtactggaaaatgtctgttctt
aaggcaactttcaaccagccagaagcgtatcttcgtcaagaactagagaaaatcgcagtc
atgaataggtcagggcctcattccaatgagtgggaaatcaaacccgagttcaaactcatt
caaaaccaagcactggaccaaagtgcgccggacgcagtggcagacgacgatgacgatatg
gacatggaggacgtggtgcttacgtga
DBGET
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