Verticillium alfalfae: VDBG_05870
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Entry
VDBG_05870 CDS
T02227
Name
(RefSeq) small nuclear ribonucleoprotein Sm D1
KO
K11087
small nuclear ribonucleoprotein D1
Organism
val
Verticillium alfalfae
Pathway
val03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
val00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
VDBG_05870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
val03041
]
VDBG_05870
03032 DNA replication proteins [BR:
val03032
]
VDBG_05870
Spliceosome [BR:
val03041
]
Complex A
U1 snRNP components
Sm proteins
VDBG_05870
U2 snRNP components
VDBG_05870
Complex B
U1 snRNP components
VDBG_05870
U4/U6.U5 tri-snRNP components
VDBG_05870
Complex C
U2 snRNP components
VDBG_05870
DNA replication proteins [BR:
val03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
VDBG_05870
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Beta-barrel_RND_rel
Motif
Other DBs
NCBI-GeneID:
9537722
NCBI-ProteinID:
XP_003003428
UniProt:
C9SLU6
LinkDB
All DBs
AA seq
121 aa
AA seq
DB search
MKLVRFLMKCANETVTIELKNGTIVNGTISSVSPQMNTALRIVKMTTKGQDPVALDTMNI
RGSTIRYFILPDSLPLDTLLVDDAPKPKNKARKETDRGGRGGPRGGPRGRGRGRGRGRGR
G
NT seq
366 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcgtcaggttcctgatgaagtgtgccaacgagacggtcacgatcgagctcaag
aatggcaccatcgtcaacggcaccatctcctccgtctcgccgcagatgaacacggctctc
cgcatagtcaagatgacgaccaagggtcaggaccccgttgcgctcgacacgatgaacatt
cgcggctcgacgattcgatactttatcctgcccgactcgctgccgctcgatacgctgctc
gtcgacgacgcgcccaagccgaagaacaaggcgaggaaggagaccgacaggggcggccgc
ggcggtcctcgtggcgggccccggggtaggggacgcggaaggggacgcggcaggggacgc
ggctga
DBGET
integrated database retrieval system
